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scnpilot_solids1_trim150_scaffold_2470

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2470_1
unknown

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comp(3..164)
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2470_2
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(432..875)
DNA (444bp) protein (148aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00036D4197
Fis family transcriptional regulator {ECO:0000313|EMBL:KDN82429.1}; TaxID=1348663 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
scnpilot_solids1_trim150_scaffold_2470_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(903..2216)
DNA (1314bp) protein (438aa)
Site-specific DNA methylase {ECO:0000313|EMBL:CDM65398.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CDM65398.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative DNA methyltransferase (EC:2.1.1.-); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
UPI0003C7FBED related cluster n=1 Tax=unknown RepID=UPI0003C7FBED rbh
scnpilot_solids1_trim150_scaffold_2470_4
unknown

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comp(2222..2911)
DNA (690bp) protein (230aa)
UPI0003C7E576 related cluster n=1 Tax=unknown RepID=UPI0003C7E576
scnpilot_solids1_trim150_scaffold_2470_5
unknown

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comp(2911..3912)
DNA (1002bp) protein (334aa)
UPI0003C7EBBD related cluster n=1 Tax=unknown RepID=UPI0003C7EBBD
scnpilot_solids1_trim150_scaffold_2470_6
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3909..5897)
DNA (1989bp) protein (663aa)
UPI0003C7F696 related cluster n=1 Tax=unknown RepID=UPI0003C7F696
Uncharacterized protein {ECO:0000313|EMBL:EDM31275.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM1035.;"
scnpilot_solids1_trim150_scaffold_2470_7
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(6156..7877)
DNA (1722bp) protein (574aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI0003718EBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB16150.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
scnpilot_solids1_trim150_scaffold_2470_8
unknown

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7959..8447
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2470_9

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comp(8508..8798)
DNA (291bp) protein (97aa)
Putative transposase n=1 Tax=Rhodococcus sp. JVH1 RepID=J1R2C4_9NOCA
Marine sediment metagenome DNA, contig: S06H3_S21094 {ECO:0000313|EMBL:GAI58191.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
scnpilot_solids1_trim150_scaffold_2470_10

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comp(8955..9263)
DNA (309bp) protein (103aa)
Transposase of ISCARN68, IS256 family n=1 Tax=mine drainage metagenome RepID=E6PZ24_9ZZZZ
Transposase of ISCARN68, IS256 family {ECO:0000313|EMBL:CBI08122.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, mutator type
Displaying 10 items

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