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scnpilot_solids1_trim150_scaffold_2556

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2556_1
unknown

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2..145
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2556_2
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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682..1248
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00036DCB2A
Uncharacterized protein {ECO:0000313|EMBL:AJC83286.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2556_3
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1248..1598
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00035D46A1
Uncharacterized protein {ECO:0000313|EMBL:EQB16935.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
scnpilot_solids1_trim150_scaffold_2556_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1595..2866
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2ZC08_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:AJC83284.1}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2556_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2732..3553)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QGS3_RHOPT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE99670.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
scnpilot_solids1_trim150_scaffold_2556_6
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3869..5617
DNA (1749bp) protein (583aa)
ATP-dependent endonuclease n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036BEB01 rbh
AAA ATPase domain protein {ECO:0000313|EMBL:AIO36739.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2556_7
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5614..7341
DNA (1728bp) protein (576aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI000363F5D1 rbh
ATP-dependent DNA helicase rbh
scnpilot_solids1_trim150_scaffold_2556_8
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7956..9239)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UEJ8_RALSL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGH83607.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
scnpilot_solids1_trim150_scaffold_2556_9
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9324..10460)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036277C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJZ56849.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2556_10
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10554..10874)
DNA (321bp) protein (107aa)
Transcriptional regulator, XRE family n=3 Tax=Proteobacteria RepID=A6V7R4_PSEA7
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:ELT46415.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
scnpilot_solids1_trim150_scaffold_2556_11
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10874..11236)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003789745
Uncharacterized protein {ECO:0000313|EMBL:KEZ03615.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2556_12
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11313..12665)
DNA (1353bp) protein (451aa)
integrase n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003658395 rbh
Integrase {ECO:0000313|EMBL:KEZ03616.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_2556_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13157..15094)
DNA (1938bp) protein (646aa)
Sulfatase-modifying factor protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W063_9GAMM
Sulfatase-modifying factor protein {ECO:0000313|EMBL:EIL92854.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2556_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15144..16451
DNA (1308bp) protein (436aa)
Ribonuclease D n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W064_9GAMM
Ribonuclease D {ECO:0000313|EMBL:EIL92855.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribonuclease D
scnpilot_solids1_trim150_scaffold_2556_trna_1
unknown

Not on your lists

16468..16541
DNA (74bp)
transferRNA Pro
scnpilot_solids1_trim150_scaffold_2556_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16635..17453)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL95042.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2556_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17542..18030)
DNA (489bp) protein (163aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodan
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6F0_9GAMM
Displaying 17 items

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