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scnpilot_solids1_trim150_scaffold_2632

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2632_1
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..534)
DNA (534bp) protein (178aa)
3-oxoacid CoA-transferase subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
3-oxoacid CoA-transferase, subunit A {ECO:0000313|EMBL:ABF53832.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ABF53832.1};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
3-oxoacid CoA-transferase, subunit A n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR90_SPHAL
scnpilot_solids1_trim150_scaffold_2632_2
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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623..1525
DNA (903bp) protein (301aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU22_9SPHN rbh
LysR family transcriptional regulator rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_2632_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1583..2395
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDG9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81778.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2632_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2593..3243)
DNA (651bp) protein (217aa)
Epoxide hydrolase domain-containing phosphatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2M0_9SPHN rbh
Epoxide hydrolase domain-containing phosphatase {ECO:0000313|EMBL:ENY81777.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
epoxide hydrolase domain-containing phosphatase rbh
scnpilot_solids1_trim150_scaffold_2632_5
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3475..4578)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTJ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB58851.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2632_6
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4632..5015
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A960_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:KGB58850.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2632_7
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5186..5869)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU18_9SPHN
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_2632_8
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5887..6819)
DNA (933bp) protein (311aa)
putative gluconolactonase precursor; K01053 gluconolactonase [EC:3.1.1.17]
Gluconolactonase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDG5_9SPHN
Gluconolactonase {ECO:0000313|EMBL:KGB58848.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
scnpilot_solids1_trim150_scaffold_2632_9
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6866..7465
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2L5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB58847.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2632_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7626..7934
DNA (309bp) protein (103aa)
succinate-semialdehyde dehydrogenase (NAD(P)+); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate semialdehyde dehydrogenase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GR97_SPHAL
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying 10 items

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