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scnpilot_solids1_trim150_scaffold_2685

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2685_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..550
DNA (549bp) protein (183aa)
Succinoglycan biosynthesis protein exoI-like n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFG3_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53752.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
succinoglycan biosynthesis protein exoI-like
scnpilot_solids1_trim150_scaffold_2685_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

547..885
DNA (339bp) protein (113aa)
Single-stranded DNA-binding protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8ND73_AFIFE
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative single-stranded DNA-binding protein
scnpilot_solids1_trim150_scaffold_2685_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

872..1456
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8N8G2_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26857.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
putative nuclease rbh
scnpilot_solids1_trim150_scaffold_2685_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1453..2001
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKY1_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS26858.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2685_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2011..2679
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BR80_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08324.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_2685_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2823..3389
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK33_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53755.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2685_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3414..4118
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK32_OLICO rbh
Bradyrhizobium elkanii strain UASWS1015 Contig134, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53756.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2685_8
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4287..4511
DNA (225bp) protein (75aa)
UspA domain protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5V4_RHIFR
UspA domain protein {ECO:0000313|EMBL:CDM62358.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
UspA domain-containing protein
scnpilot_solids1_trim150_scaffold_2685_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4652..5068
DNA (417bp) protein (139aa)
UspA domain protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X5V4_RHIFR
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:AFL51260.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
scnpilot_solids1_trim150_scaffold_2685_10
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5138..5383)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8NZX5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ETR79416.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2685_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5415..6035)
DNA (621bp) protein (207aa)
Autoinducer synthase n=2 Tax=Oligotropha carboxidovorans RepID=B6JK74_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig144, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53396.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
autoinducer synthase
scnpilot_solids1_trim150_scaffold_2685_12
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6156..6428)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVL7_9BRAD
Polymerase {ECO:0000313|EMBL:KFG70940.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2685_13
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6509..6832)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BR87_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08331.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_2685_14
unknown

Not on your lists

comp(7026..7664)
DNA (639bp) protein (213aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2685_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7908..8027
DNA (120bp) protein (40aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK71_OLICO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08333.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_2685_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8225..9151
DNA (927bp) protein (309aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=B6JK70_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIZ36521.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2685_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9362..10036
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036C3505
Uncharacterized protein {ECO:0000313|EMBL:ETR79339.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2685_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10208..10810
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Rhizobium radiobacter RepID=M8A0S2_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:KIZ36518.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2685_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10822..11223
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002EFC107
Uncharacterized protein {ECO:0000313|EMBL:KIZ36517.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2685_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11329..13986
DNA (2658bp) protein (886aa)
N-6 DNA methylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QEY6_NITHX
Lactate dehydrogenase {ECO:0000313|EMBL:KIZ36522.1}; Flags: Fragment;; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
N-6 DNA methylase
Displaying 20 items

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