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scnpilot_solids1_trim150_scaffold_2710

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2710_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..180
DNA (180bp) protein (60aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Triosephosphate isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WXG2_9GAMM
scnpilot_solids1_trim150_scaffold_2710_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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204..665
DNA (462bp) protein (154aa)
Preprotein translocase subunit SecG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI12_9GAMM
Preprotein translocase subunit SecG {ECO:0000313|EMBL:EIL99103.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein translocase subunit secG
scnpilot_solids1_trim150_scaffold_2710_trna_1
unknown

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678..759
DNA (82bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_2710_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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947..2164
DNA (1218bp) protein (406aa)
Phage-related integrase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VN84_9GAMM
Phage-related integrase {ECO:0000313|EMBL:EIL88675.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phage-related integrase
scnpilot_solids1_trim150_scaffold_2710_4
unknown

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2277..2615
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2710_5
unknown

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2615..2851
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2710_6
unknown

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2992..3690
DNA (699bp) protein (233aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2710_7
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3884..4108
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UDZ3_XANAP
Uncharacterized protein {ECO:0000313|EMBL:CEM58187.1}; TaxID=340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2710_8
unknown

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4098..4430
DNA (333bp) protein (111aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2710_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4427..4867
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W1B3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93254.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2710_10

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4864..6744
DNA (1881bp) protein (627aa)
Prophage primase n=1 Tax=mine drainage metagenome RepID=T1AV19_9ZZZZ
Prophage primase {ECO:0000313|EMBL:EQD61362.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
DNA/RNA helicase
scnpilot_solids1_trim150_scaffold_2710_11
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6741..7154
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YGR8_THIV6
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_2710_12
unknown

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7151..7672
DNA (522bp) protein (174aa)

This feature has no annotations

Displaying 13 items

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