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scnpilot_solids1_trim150_scaffold_2712

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2712_1
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1853)
DNA (1851bp) protein (617aa)
Methylase n=2 Tax=Sphingobium RepID=T0I6E7_9SPHN
Putative methylase/helicase {ECO:0000313|EMBL:BAI99153.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
putative methylase/helicase
scnpilot_solids1_trim150_scaffold_2712_2
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2078..2437
DNA (360bp) protein (120aa)
Uncharacterized protein n=3 Tax=Sphingobium RepID=D4Z973_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQB33747.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
scnpilot_solids1_trim150_scaffold_2712_3
Mesorhizobium sp. LNJC405B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2742..2966)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A9AFE
Uncharacterized protein {ECO:0000313|EMBL:ESX86595.1}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2712_4
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2963..3376)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAA0_OLICO
Uncharacterized protein {ECO:0000313|EMBL:KIC55707.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2712_5
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3448..3666)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VEV7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEQ52203.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2712_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3729..4721)
DNA (993bp) protein (331aa)
UPI0003D6575A related cluster n=1 Tax=unknown RepID=UPI0003D6575A
Plasmid partitioning protein ParB {ECO:0000313|EMBL:KEQ52202.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family
scnpilot_solids1_trim150_scaffold_2712_7
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4940..5869)
DNA (930bp) protein (310aa)
plasmid partitioning protein ParB n=1 Tax=Hoeflea sp. 108 RepID=UPI000367DEDD
Plasmid partitioning protein ParB {ECO:0000313|EMBL:KEQ52202.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
ParB domain-containing protein nuclease; K03497 chromosome partitioning protein, ParB family
scnpilot_solids1_trim150_scaffold_2712_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5999..6556)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0003084461 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIJ72485.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2712_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7816)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003628CEB
Uncharacterized protein {ECO:0000313|EMBL:KEZ18644.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2712_10
unknown

Not on your lists

comp(7761..7871)
DNA (111bp) protein (37aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2712_11
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8076..8675)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI000381AFCF
Uncharacterized protein {ECO:0000313|EMBL:EJT01401.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2712_12
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8665..9111)
DNA (447bp) protein (149aa)
excisionase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F732
Uncharacterized protein {ECO:0000313|EMBL:AJD46299.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
excisonase protein
scnpilot_solids1_trim150_scaffold_2712_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9185..10546)
DNA (1362bp) protein (454aa)
Integrase family protein n=2 Tax=Afipia RepID=D6V120_9BRAD
Integrase family protein {ECO:0000313|EMBL:EFI53400.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
integrase family protein rbh
scnpilot_solids1_trim150_scaffold_2712_14
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11116..11487
DNA (372bp) protein (124aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V098_9BRAD
ArsR family transcriptional regulator {ECO:0000313|EMBL:ETR79370.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2712_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11480..12007
DNA (528bp) protein (176aa)
Low molecular weight phosphotyrosine protein phosphatase; K03741 arsenate reductase [EC:1.20.4.1]
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Afipia sp. 1NLS2 RepID=D6V099_9BRAD
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:EFI53129.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
scnpilot_solids1_trim150_scaffold_2712_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12016..12444
DNA (429bp) protein (143aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
arsenate reductase; K00537 arsenate reductase [EC:1.20.4.1]
Glutaredoxin-dependent arsenate reductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YUA3_9RHIZ
scnpilot_solids1_trim150_scaffold_2712_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12458..12607
DNA (150bp) protein (50aa)
Arsenical-resistance protein n=1 Tax=Methylobacterium extorquens (strain PA1) RepID=A9VXR6_METEP
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
Putative arsenite efflux pump ACR3 {ECO:0000313|EMBL:ACS41876.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
Displaying 17 items

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