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scnpilot_solids1_trim150_scaffold_2719

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2719_1
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..376)
DNA (375bp) protein (125aa)
Peroxiredoxin, Ohr subfamily n=1 Tax=Afipia felis ATCC 53690 RepID=K8NVY5_AFIFE
Peroxiredoxin, Ohr subfamily {ECO:0000313|EMBL:EKS30353.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
OsmC-like protein
scnpilot_solids1_trim150_scaffold_2719_2
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

522..1001
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJ78_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS30352.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
transcriptional regulator, MarR family
scnpilot_solids1_trim150_scaffold_2719_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1011..1388)
DNA (378bp) protein (126aa)
Membrane protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V174_9BRAD
MAPEG family protein {ECO:0000313|EMBL:CEG10159.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
putative transmembrane protein
scnpilot_solids1_trim150_scaffold_2719_4
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1516..1755
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V175_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53455.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2719_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2635..3831
DNA (1197bp) protein (399aa)
OmpA/MotB domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V177_9BRAD rbh
Outer membrane porin F {ECO:0000313|EMBL:CEG10157.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
OmpA/MotB domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_2719_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3939..4724
DNA (786bp) protein (262aa)
Methyltransferase type 11 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V178_9BRAD rbh
Methyltransferase type 11 {ECO:0000313|EMBL:EFI53458.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
methyltransferase type 11
scnpilot_solids1_trim150_scaffold_2719_7
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4789..6126)
DNA (1338bp) protein (446aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00581}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
argG; argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] rbh
Argininosuccinate synthase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V179_9BRAD rbh
scnpilot_solids1_trim150_scaffold_2719_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6300..7736)
DNA (1437bp) protein (479aa)
Glycosyl transferase family 39 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V180_9BRAD rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:EFI53460.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
putative glycosyltransferase rbh
scnpilot_solids1_trim150_scaffold_2719_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7727..8518)
DNA (792bp) protein (264aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V181_9BRAD rbh
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EFI53461.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
PA-phosphatase-like phosphoesterase rbh
scnpilot_solids1_trim150_scaffold_2719_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8515..8997)
DNA (483bp) protein (161aa)
Putative lipoprotein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V182_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CEG10152.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2719_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9189..10400)
DNA (1212bp) protein (404aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1
rlmN; ribosomal RNA large subunit methyltransferase N (EC:2.1.1.-); K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] rbh
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Afipia sp. 1NLS2 RepID=D6V183_9BRAD rbh
scnpilot_solids1_trim150_scaffold_2719_12
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10535..11182)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMK5_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30341.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2719_13
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11325..11702)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V185_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53465.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2719_14
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12109..12411)
DNA (303bp) protein (101aa)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000256|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000256|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000256|HAMAP-Rule:MF_00434}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V186_9BRAD
scnpilot_solids1_trim150_scaffold_2719_15
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12575..13990
DNA (1416bp) protein (472aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BG87_OLICM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI04949.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_2719_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14160..14645
DNA (486bp) protein (162aa)
GTP-binding protein TypA/BipA n=2 Tax=Oligotropha carboxidovorans RepID=B6JAU1_OLICO
typA; GTP-binding protein typA/bipA; K06207 GTP-binding protein
GTP-binding protein typA/bipA {ECO:0000313|EMBL:AEI04948.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Displaying 16 items

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