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scnpilot_solids1_trim150_scaffold_2744

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2744_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..816)
DNA (816bp) protein (272aa)
Glutathione synthase/ribosomal protein S6 modification protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD5_9GAMM
Glutathione synthase/ribosomal protein S6 modification protein {ECO:0000313|EMBL:EIL90826.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)
scnpilot_solids1_trim150_scaffold_2744_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1019..1492
DNA (474bp) protein (158aa)
Acetyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WCI1_9GAMM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGG90994.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2744_3
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1639..2328)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT2_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_2744_4
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2430..2606
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLK1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL88092.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2744_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2608..3477
DNA (870bp) protein (290aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT1_9GAMM
scnpilot_solids1_trim150_scaffold_2744_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3543..4235
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NLT2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG91002.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2744_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4243..5142
DNA (900bp) protein (300aa)
Tyrosine recombinase XerC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUD0_9GAMM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tyrosine recombinase XerC subunit
scnpilot_solids1_trim150_scaffold_2744_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5289..5843
DNA (555bp) protein (185aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent protease subunit HslV n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUC9_9GAMM
HslV component of HslUV peptidase
scnpilot_solids1_trim150_scaffold_2744_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5914..7257
DNA (1344bp) protein (448aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUC8_9GAMM
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ATP-dependent protease HslVU, ATPase subunit
scnpilot_solids1_trim150_scaffold_2744_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7286..7834
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBS6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96917.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2744_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7980..8879
DNA (900bp) protein (300aa)
Ribokinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUC6_9GAMM
Ribokinase {ECO:0000313|EMBL:EIL90817.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribokinase rbh
scnpilot_solids1_trim150_scaffold_2744_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8876..9448
DNA (573bp) protein (191aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUC5_9GAMM
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EIL90816.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
nicotinamide mononucleotide transporter PnuC; K03811 nicotinamide mononucleotide transporter
scnpilot_solids1_trim150_scaffold_2744_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9445..10503
DNA (1059bp) protein (353aa)
Putative transcriptional regulator NadR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUC4_9GAMM
Putative transcriptional regulator NadR {ECO:0000313|EMBL:EIL90815.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cytidyltransferase-related domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_2744_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10516..10956)
DNA (441bp) protein (147aa)
VWA containing CoxE family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUC3_9GAMM
VWA containing CoxE family protein {ECO:0000313|EMBL:EIL90814.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
VWA containing CoxE family protein
scnpilot_solids1_trim150_scaffold_2744_15
unknown

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11025..11375
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 15 items

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