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scnpilot_solids1_trim150_scaffold_2793

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2793_1
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..167
DNA (165bp) protein (55aa)
Putative relaxase protein MobC n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:GAE48495.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
scnpilot_solids1_trim150_scaffold_2793_2
Pseudomonas sp. MRSN12121, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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157..2541
DNA (2385bp) protein (795aa)
Relaxase/mobilization protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S7_9XANT rbh
Plasmid, complete sequence {ECO:0000313|EMBL:AJO81912.1}; TaxID=1611770 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MRSN12121.;"
relaxase/mobilization nuclease family protein rbh
scnpilot_solids1_trim150_scaffold_2793_3
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2700..3329
DNA (630bp) protein (210aa)
Plasmid partitioning protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S8_9XANT rbh
Plasmid partitioning protein {ECO:0000313|EMBL:CCC18698.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
ParaA family ATPase; K03496 chromosome partitioning protein rbh
scnpilot_solids1_trim150_scaffold_2793_4
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3342..3557
DNA (216bp) protein (72aa)
Plasmid partition protein ParB, truncated n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4S9_9XANT
Plasmid partition protein ParB, truncated {ECO:0000313|EMBL:GAE52559.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
plasmid partition protein ParB, truncated
scnpilot_solids1_trim150_scaffold_2793_5
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3574..4272
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4T0_9XANT rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE52560.1}; TaxID=1414836 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. MAFF 311562.;"
scnpilot_solids1_trim150_scaffold_2793_6
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4285..4476
DNA (192bp) protein (64aa)
Plasmid-like protein n=1 Tax=Xanthomonas axonopodis pv. malvacearum str. GSPB1386 RepID=K8FU84_9XANT
Plasmid-like protein {ECO:0000313|EMBL:CEL42668.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
plasmid-like protein
scnpilot_solids1_trim150_scaffold_2793_7
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4493..5395)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii (strain ATCC BAA-894) RepID=A7MRC6_CROS8 rbh
Uncharacterized protein {ECO:0000313|EMBL:CEH52152.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2793_8
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5395..6627)
DNA (1233bp) protein (411aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;"
pliMCI; DNA (cytosine-5)-methyltransferase PliMCI; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Cytosine-specific methyltransferase n=1 Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMQ9_9XANT rbh
scnpilot_solids1_trim150_scaffold_2793_9
Xanthomonas arboricola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6934..7512)
DNA (579bp) protein (193aa)
Invertase recombinase-like protein n=1 Tax=Xanthomonas arboricola pv. pruni str. CFBP 5530 RepID=G4U4T1_9XANT rbh
Invertase recombinase-like protein {ECO:0000313|EMBL:CCC18701.1}; TaxID=1045865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas arboricola pv. pruni str. CFBP 5530.;"
site-specific recombinase, DNA invertase Pin
scnpilot_solids1_trim150_scaffold_2793_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7995..8723
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BLM7_DELAS rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO23396.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2793_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8836..11601
DNA (2766bp) protein (922aa)
magnesium-transporting ATPase MgtA (EC:3.6.3.2); K01531 Mg2+-importing ATPase [EC:3.6.3.2] rbh
magnesium-transporting ATPase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B60 rbh
Magnesium-transporting ATPase MgtA {ECO:0000313|EMBL:GAO23397.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_2793_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11612..12328
DNA (717bp) protein (239aa)
methyltransferase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002377B61 rbh
Mg2+ transport ATPase protein C {ECO:0000313|EMBL:GAO23398.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
mgtC1; Mg2+ transport ATPase; K07507 putative Mg2+ transporter-C (MgtC) family protein rbh
scnpilot_solids1_trim150_scaffold_2793_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12340..12954)
DNA (615bp) protein (205aa)
TniR protein n=1 Tax=Pseudomonas putida ND6 RepID=I3UT35_PSEPU rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:GAO23399.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
TniR protein rbh
scnpilot_solids1_trim150_scaffold_2793_14
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13015..13584)
DNA (570bp) protein (190aa)
TniQ n=1 Tax=Comamonas sp. B-9 RepID=UPI0002E26693 rbh
TniQ protein {ECO:0000313|EMBL:GAO23400.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
tniQ; transposon related protein TniQ rbh
Displaying 14 items

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