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scnpilot_solids1_trim150_scaffold_2813

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2813_1
unknown

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comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2813_2
Pseudomonas sp. GM33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(194..565)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM33 RepID=J2YR51_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EJM43403.1}; Flags: Precursor;; TaxID=1144329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM33.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2813_3
R_NC10_66_22, NC10, Bacteria

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882..1799
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003716F4B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
scnpilot_solids1_trim150_scaffold_2813_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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1881..3350
DNA (1470bp) protein (490aa)
Extracellular solute-binding protein family 5 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C963_SPHTD rbh
extracellular solute-binding protein family 5; K02035 peptide/nickel transport system substrate-binding protein rbh
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACZ40356.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
scnpilot_solids1_trim150_scaffold_2813_5
RLO_PLX_64_10, Bacteria

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3343..4476
DNA (1134bp) protein (378aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
scnpilot_solids1_trim150_scaffold_2813_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4506..5420
DNA (915bp) protein (305aa)
Dipeptide transport system permease DppB id=4948701 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
Tax=GWA2_Rokubacteria_70_23_curated
scnpilot_solids1_trim150_scaffold_2813_7
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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5420..6316
DNA (897bp) protein (299aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C965_SPHTD
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
scnpilot_solids1_trim150_scaffold_2813_8
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6366..7259
DNA (894bp) protein (298aa)
Transcriptional regulator, RpiR family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2A1_MAHA5
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:AEE96148.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
scnpilot_solids1_trim150_scaffold_2813_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7388..7576)
DNA (189bp) protein (63aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A id=2591441 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 9 items

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