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scnpilot_solids1_trim150_scaffold_4125

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4125_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..3022
DNA (3021bp) protein (1007aa)
Phage tail tape measure protein n=1 Tax=Pseudomonas fluorescens R124 RepID=K0WGB0_PSEFL
Phage tail tape measure protein {ECO:0000313|EMBL:EJZ58462.1}; TaxID=743713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens R124.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4125_2
unknown

Not on your lists

3025..3387
DNA (363bp) protein (121aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_3
unknown

Not on your lists

3384..3617
DNA (234bp) protein (78aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3620..3805
DNA (186bp) protein (62aa)
Stenotrophomonas maltophilia strain ZBG7B contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87453.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
scnpilot_solids1_trim150_scaffold_4125_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

4263..4667
DNA (405bp) protein (135aa)
NLP/P60 protein n=2 Tax=Desulfovibrio vulgaris RepID=E3ISX7_DESVR
tail assembly protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
scnpilot_solids1_trim150_scaffold_4125_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4937..7051
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQF1_RHILT
Stenotrophomonas maltophilia strain ZBG7B contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP87452.1}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4125_7
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7209..10397
DNA (3189bp) protein (1063aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD166 RepID=J8M9M9_BACCE
Uncharacterized protein {ECO:0000313|EMBL:KEK23945.1}; TaxID=574375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus gaemokensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4125_8
unknown

Not on your lists

10407..10928
DNA (522bp) protein (174aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_9
unknown

Not on your lists

10940..11248
DNA (309bp) protein (103aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_10
unknown

Not on your lists

11245..11412
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_11
unknown

Not on your lists

comp(11418..11639)
DNA (222bp) protein (74aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_12
Ruegeria sp. TM1040, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11718..12347
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruegeria sp. (strain TM1040) RepID=Q1GG33_RUEST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF63559.1}; TaxID=292414 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. (strain TM1040) (Silicibacter sp.).;"
scnpilot_solids1_trim150_scaffold_4125_13
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12344..12703
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Xylella fastidiosa RepID=Q3R2U9_XYLFS
Uncharacterized protein {ECO:0000313|EMBL:EAO13176.1}; Flags: Precursor;; TaxID=155919 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa Dixon.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4125_14
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12760..13044
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa (strain 9a5c) RepID=Q9P9S5_XYLFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF85300.1}; TaxID=160492 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa (strain 9a5c).;"
scnpilot_solids1_trim150_scaffold_4125_15
unknown

Not on your lists

comp(12958..13176)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_16
unknown

Not on your lists

comp(13271..13675)
DNA (405bp) protein (135aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13693..14043)
DNA (351bp) protein (117aa)
Cro regulatory protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KW41_STEMA
Cro regulatory protein {ECO:0000313|EMBL:EQM83231.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
transcriptional regulator transcription regulator protein
scnpilot_solids1_trim150_scaffold_4125_18
unknown

Not on your lists

14123..14347
DNA (225bp) protein (75aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_19
unknown

Not on your lists

14344..14640
DNA (297bp) protein (99aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_20

Not on your lists

14637..15416
DNA (780bp) protein (260aa)
Putative Site-specific DNA recombinase (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8R0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN81432.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative site-specific DNA recombinase
scnpilot_solids1_trim150_scaffold_4125_21
unknown

Not on your lists

15409..15714
DNA (306bp) protein (102aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_22
Xylella fastidiosa, Xylella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15711..16175
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa 6c RepID=V8KAD1_XYLFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETE33462.1}; TaxID=1214121 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xylella.;" source="Xylella fastidiosa 32.;"
scnpilot_solids1_trim150_scaffold_4125_23
unknown

Not on your lists

16180..16416
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_24
unknown

Not on your lists

16599..16769
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_25
unknown

Not on your lists

16769..17152
DNA (384bp) protein (128aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_26
unknown

Not on your lists

17152..17439
DNA (288bp) protein (96aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_27
unknown

Not on your lists

17436..17627
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_28
unknown

Not on your lists

17755..18048
DNA (294bp) protein (98aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_29
unknown

Not on your lists

18045..18257
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4125_30
Chromohalobacter salexigens, Chromohalobacter, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18254..19237
DNA (984bp) protein (328aa)
Tyrosine recombinase XerC n=1 Tax=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) RepID=XERC_CHRSD
phage integrase; K03733 integrase/recombinase XerC
Tyrosine recombinase XerC {ECO:0000255|HAMAP-Rule:MF_01808}; TaxID=290398 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Chromohalobacter.;" source="Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB; 13768).;"
Displaying items 1-30 of 32 in total

View Taxonomy