ggKbase home page

scnpilot_solids1_trim150_scaffold_4284

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4284_1

Not on your lists

49..414
DNA (366bp) protein (122aa)
TrbJ entry exclusion during conjugation protein n=1 Tax=uncultured bacterium pAKD4 RepID=D4N5H8_9BACT
TrbJ entry exclusion during conjugation protein {ECO:0000313|EMBL:ADD63283.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
trbJ; P-type conjugative transfer protein TrbJ
scnpilot_solids1_trim150_scaffold_4284_2

Not on your lists

425..664
DNA (240bp) protein (80aa)
TrbK entry exclusion during conjugation protein n=1 Tax=uncultured bacterium pAKD4 RepID=D4N5H9_9BACT
TrbK entry exclusion during conjugation protein {ECO:0000313|EMBL:ADD63282.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
entry exclusion protein TrbK
scnpilot_solids1_trim150_scaffold_4284_3

Not on your lists

675..2414
DNA (1740bp) protein (580aa)
TrbL mating pair formation protein n=1 Tax=uncultured bacterium pAKD4 RepID=D4N5I0_9BACT rbh
TrbL mating pair formation protein {ECO:0000313|EMBL:ADD63284.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
P-type conjugative transfer protein trbl; K07344 type IV secretion system protein TrbL
scnpilot_solids1_trim150_scaffold_4284_4
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2434..3027
DNA (594bp) protein (198aa)
TrbM mating pair formation protein n=2 Tax=Bacteria RepID=D4N5I1_9BACT rbh
TrbM mating pair formation protein {ECO:0000313|EMBL:AFU76006.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
conjugal transfer protein TrbM
scnpilot_solids1_trim150_scaffold_4284_5

Not on your lists

3041..3646
DNA (606bp) protein (202aa)
TrbN mating pair formation protein, muramidase/lysozyme n=2 Tax=Bacteria RepID=D4N5I2_9BACT rbh
TrbN mating pair formation protein, muramidase/lysozyme {ECO:0000313|EMBL:ADD63286.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
conjugal transfer protein TrbN
scnpilot_solids1_trim150_scaffold_4284_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3671..3934
DNA (264bp) protein (88aa)
TrbO mating pair formation protein n=2 Tax=Bacteria RepID=D4N5I3_9BACT
TrbO mating pair formation protein {ECO:0000313|EMBL:AFU76008.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
trbO; TrbO protein
scnpilot_solids1_trim150_scaffold_4284_7

Not on your lists

3931..4635
DNA (705bp) protein (235aa)
TrbP mating pair formation protein n=2 Tax=Bacteria RepID=D4N5I4_9BACT rbh
TrbP mating pair formation protein {ECO:0000313|EMBL:ADD63288.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
conjugal transfer protein TrbP
scnpilot_solids1_trim150_scaffold_4284_8
Enterobacter aerogenes, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4649..5074
DNA (426bp) protein (142aa)
Upf30.5 n=1 Tax=Enterobacter aerogenes RepID=P71192_ENTAE
Upf30.5 {ECO:0000313|EMBL:AAC64458.1}; TaxID=548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter aerogenes (Aerobacter aerogenes).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4284_9

Not on your lists

5076..5342
DNA (267bp) protein (89aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=D4N5I5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ADD63289.1}; TaxID=743682 species="Bacteria; environmental samples.;" source="uncultured bacterium pAKD4.;"
nuclease (SNase-like)
scnpilot_solids1_trim150_scaffold_4284_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5733..6476
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y985_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74686.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
scnpilot_solids1_trim150_scaffold_4284_11
unknown

Not on your lists

comp(6658..6753)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4284_12
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6872..7099
DNA (228bp) protein (76aa)
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW8_9GAMM
Copper chaperone {ECO:0000313|EMBL:KDP87234.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
copper chaperone
scnpilot_solids1_trim150_scaffold_4284_13
unknown

Not on your lists

comp(7054..7626)
DNA (573bp) protein (191aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4284_14
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7655..9289
DNA (1635bp) protein (545aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AJZ56232.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJZ56232.1};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW9_9GAMM
heavy metal translocating P-type ATPase
Displaying 14 items

View Taxonomy