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scnpilot_solids1_trim150_scaffold_4667

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4667_1
unknown

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158..355
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4667_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(915..1751)
DNA (837bp) protein (279aa)
Non-heme chloroperoxidase {ECO:0000313|EMBL:EGF94799.1}; EC=1.11.1.10 {ECO:0000313|EMBL:EGF94799.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
alpha/beta hydrolase fold protein; K00433 chloride peroxidase [EC:1.11.1.10] rbh
Non-heme chloroperoxidase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZH5_BREDI rbh
scnpilot_solids1_trim150_scaffold_4667_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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1986..2606
DNA (621bp) protein (207aa)
transposase ISRSO1 n=1 Tax=Methylocystis parvus RepID=UPI000366D5AF rbh
Isrso1-transposase rbh
Isrso1-transposase protein {ECO:0000313|EMBL:ADZ68929.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
scnpilot_solids1_trim150_scaffold_4667_4

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comp(2613..2783)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00036B36DD
Uncharacterized protein {ECO:0000313|EMBL:KKK64494.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_4667_5
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2967..3323)
DNA (357bp) protein (119aa)
Uncharacterized protein n=3 Tax=Corynebacterium glutamicum RepID=I0LLM7_CORGK
hypothetical protein
Putative uncharacterized protein Cgl2264 {ECO:0000313|EMBL:BAB99657.1}; Uncharacterized protein {ECO:0000313|EMBL:CAF20606.1}; TaxID=196627 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /; LMG 3730 / NCIMB 10025).;"
scnpilot_solids1_trim150_scaffold_4667_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3299..3517)
DNA (219bp) protein (73aa)
hypothetical protein, partial n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000374FC94
Uncharacterized protein {ECO:0000313|EMBL:EKU82016.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
efflux protein
scnpilot_solids1_trim150_scaffold_4667_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4091..4702)
DNA (612bp) protein (204aa)
Transcriptional regulator, TetR family n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZH0_BREDI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EGF94794.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_4667_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4752..4970)
DNA (219bp) protein (73aa)
Proline racemase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZG9_BREDI
Proline racemase {ECO:0000313|EMBL:EGF94793.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
scnpilot_solids1_trim150_scaffold_4667_9
unknown

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5235..5669
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4667_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5739..6149
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZG8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94792.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
scnpilot_solids1_trim150_scaffold_4667_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6387..8279
DNA (1893bp) protein (631aa)
TonB-dependent Receptor Plug domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZG7_BREDI rbh
TonB-dependent Receptor Plug domain protein {ECO:0000313|EMBL:EGF94791.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor
Displaying 11 items

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