ggKbase home page

scnpilot_solids1_trim150_scaffold_4730

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4730_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..252)
DNA (252bp) protein (84aa)
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:KJL30456.1}; EC=1.1.1.69 {ECO:0000313|EMBL:KJL30456.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Putative dehydrogenase n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V5X8_ESCHE
2-deoxy-D-gluconate 3-dehydrogenase
scnpilot_solids1_trim150_scaffold_4730_2
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(324..1202)
DNA (879bp) protein (293aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68) rbh
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Agromyces italicus RepID=UPI0003B5D71A rbh
Membrane protein {ECO:0000313|EMBL:KJC64438.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
scnpilot_solids1_trim150_scaffold_4730_3
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1278..2168)
DNA (891bp) protein (297aa)
Dihydrodipicolinate synthase (EC:4.3.3.7) rbh
Dihydrodipicolinate synthase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXK9_TEPAE rbh
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AJY45586.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
scnpilot_solids1_trim150_scaffold_4730_4
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2324..4390)
DNA (2067bp) protein (689aa)
aldehyde dehydrogenase (EC:1.2.1.-); K14519 NADP-dependent aldehyde dehydrogenase [EC:1.2.1.4]
Aldehyde dehydrogenase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UVC7_9MICC rbh
Aldehyde dehydrogenase {ECO:0000313|EMBL:EMY33015.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
scnpilot_solids1_trim150_scaffold_4730_5
unknown

Not on your lists

comp(4387..4578)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4730_6
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5560..5859
DNA (300bp) protein (100aa)
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EPX85278.1}; EC=4.3.3.7 {ECO:0000313|EMBL:EPX85278.1};; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus DSM 16094.;"
Dihydrodipicolinate synthase n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9R018_9RHOB
dihydrodipicolinate synthase
scnpilot_solids1_trim150_scaffold_4730_7
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5856..6443
DNA (588bp) protein (196aa)
Dihydrodipicolinate synthase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NDF5_9ACTO
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EGG48592.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
dihydrodipicolinate synthase
scnpilot_solids1_trim150_scaffold_4730_8
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6561..7277
DNA (717bp) protein (239aa)
GntR family transcriptional regulator n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6KQ34_STRNV
GntR family transcriptional regulator {ECO:0000313|EMBL:EST33551.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
scnpilot_solids1_trim150_scaffold_4730_9
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7290..8114)
DNA (825bp) protein (275aa)
shikimate dehydrogenase (EC:1.1.1.25); K00014 shikimate dehydrogenase [EC:1.1.1.25]
Shikimate dehydrogenase family protein n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B6C3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFI25098.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter enshiensis.;"
scnpilot_solids1_trim150_scaffold_4730_10
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(8111..9127)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000360926A
periplasmic binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator
Tax=S_OP1_64_32
scnpilot_solids1_trim150_scaffold_4730_11
Rhizobium lupini, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9148..10263)
DNA (1116bp) protein (372aa)
ugpC; sn-glycerol 3-phosphate ABC transporter ATP-binding protein (EC:3.6.3.25); K06020 sulfate-transporting ATPase [EC:3.6.3.25]
Putative sugar ABC transporter n=1 Tax=Rhizobium lupini HPC(L) RepID=K5CZX0_RHILU rbh
Putative sugar ABC transporter {ECO:0000313|EMBL:EKJ94935.1}; TaxID=1229491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium lupini HPC(L).;"
scnpilot_solids1_trim150_scaffold_4730_12
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10278..10835)
DNA (558bp) protein (186aa)
sugar ABC transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031E799E
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EJJ31452.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
sugar ABC transporter; K02026 multiple sugar transport system permease protein
Displaying 12 items

View Taxonomy