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scnpilot_solids1_trim150_scaffold_4976

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4976_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1042
DNA (1041bp) protein (347aa)
TonB-dependent receptor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0F9_ACIDE
TonB-dependent receptor {ECO:0000313|EMBL:EER61977.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_4976_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1055..1636
DNA (582bp) protein (194aa)
adenosylcobinamide kinase (EC:2.7.1.156); K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
Adenosylcobinamide kinase {ECO:0000313|EMBL:ABM41333.1}; EC=2.7.1.156 {ECO:0000313|EMBL:ABM41333.1};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Adenosylcobinamide kinase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W508_ACISJ
scnpilot_solids1_trim150_scaffold_4976_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1633..2505
DNA (873bp) protein (291aa)
Cobalamin ABC transporter periplasmic protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0IBT2_9BURK
cobalamin ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_4976_4
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2563..3639
DNA (1077bp) protein (359aa)
Transport system permease n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG89_9BURK
Transport system permease {ECO:0000313|EMBL:EIK88229.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
transport system permease; K02015 iron complex transport system permease protein
scnpilot_solids1_trim150_scaffold_4976_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3636..4418
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B56D8 rbh
ABC transporter-like protein rbh
Tax=BJP_08E140C01_Burkholderiales_65_30
scnpilot_solids1_trim150_scaffold_4976_6
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4408..5862
DNA (1455bp) protein (485aa)
cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17); K00798 cob(I)alamin adenosyltransferase [EC:2.5.1.17]
Cob(I)alamin adenosyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1G3_9BURK
ATP:corrinoid adenosyltransferase {ECO:0000313|EMBL:BAO80284.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
scnpilot_solids1_trim150_scaffold_4976_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5706..6230)
DNA (525bp) protein (175aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9C204_DELAS
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids1_trim150_scaffold_4976_8
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6242..6610)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSW9_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36021.1}; Flags: Precursor;; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
scnpilot_solids1_trim150_scaffold_4976_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6765..7292
DNA (528bp) protein (176aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035DA74E
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_4976_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7292..7900
DNA (609bp) protein (203aa)
cobalamin biosynthesis protein; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
Cobalamin biosynthesis protein CobD n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y649_RAMTT
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_solids1_trim150_scaffold_4976_11
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7842..8213
DNA (372bp) protein (124aa)
cobalamin biosynthesis protein CobD; K02227 adenosylcobinamide-phosphate synthase [EC:6.3.1.10] id=5081266 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cobD; putative cobalamin biosynthesis protein CobD
Tax=GWE1_Burkholderiales_65_30_curated
scnpilot_solids1_trim150_scaffold_4976_12
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8207..8770
DNA (564bp) protein (188aa)
Class I/II aminotransferase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG93_9BURK
putative pyridoxal phosphate-dependent transferase
Tax=GWA2_Curvibacter_64_110_curated
Displaying 12 items

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