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scnpilot_solids1_trim150_scaffold_9718

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_9718_1
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..580)
DNA (579bp) protein (193aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
fumarase (EC:4.2.1.2)
Fumarate hydratase class II n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNI9_9GAMM
scnpilot_solids1_trim150_scaffold_9718_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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970..2217
DNA (1248bp) protein (416aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW89_9GAMM
scnpilot_solids1_trim150_scaffold_9718_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2321..4024
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WS45_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89413.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_9718_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4210..4935
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W187_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93228.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Putative cytoplasmic protein (Fragment)
scnpilot_solids1_trim150_scaffold_9718_5
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5154..6116)
DNA (963bp) protein (321aa)
Imidazolonepropionase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCT3_PHEZH
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:GAK33981.1}; Flags: Precursor;; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
imidazolonepropionase
scnpilot_solids1_trim150_scaffold_9718_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6237..7580)
DNA (1344bp) protein (448aa)
Uncharacterized protein (Fragment) n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUI7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL90878.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transposase
scnpilot_solids1_trim150_scaffold_9718_7

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9578..9805
DNA (228bp) protein (76aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZCU9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD42858.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
copper chaperone
scnpilot_solids1_trim150_scaffold_9718_8
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9802..10347
DNA (546bp) protein (182aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase (Fragment) n=3 Tax=mine drainage metagenome RepID=T0ZFW3_9ZZZZ
ATPase P {ECO:0000313|EMBL:KDP87233.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
scnpilot_solids1_trim150_scaffold_9718_9
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10383..11150
DNA (768bp) protein (256aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AJZ56232.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJZ56232.1};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
Heavy metal translocating P-type ATPase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHW9_9GAMM
heavy metal translocating P-type ATPase
Displaying 9 items

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