name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids1_trim150_scaffold_41_1
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(107..1057)
|
Glutathione synthetase n=2 Tax=Alicycliphilus denitrificans RepID=E8TW28_ALIDB
rbh
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
|
|
scnpilot_solids1_trim150_scaffold_41_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1069..2253)
|
Benzoate transporter n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WCN9_ACISJ
Variovorax paradoxus strain MEDvA23 contig_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ27466.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
benzoate transporter; K05782 benzoate membrane transport protein
|
|
scnpilot_solids1_trim150_scaffold_41_3
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2276..4165)
|
Probable potassium transport system protein kup n=1 Tax=Polaromonas sp. CF318 RepID=J3CXG6_9BURK
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
potassium transporter
|
|
scnpilot_solids1_trim150_scaffold_41_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4166..6067)
|
Probable potassium transport system protein kup n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G998_ALIDK
rbh
Low affinity potassium transport system protein kup; K03549 KUP system potassium uptake protein
rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
scnpilot_solids1_trim150_scaffold_41_5
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6091..7359)
|
Glutamate--cysteine ligase n=2 Tax=Acidovorax RepID=A1WCP1_ACISJ
rbh
Glutamate/cysteine ligase {ECO:0000313|EMBL:ACM34688.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|
|
scnpilot_solids1_trim150_scaffold_41_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7407..8873)
|
Trk system potassium uptake protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW32_ALIDB
rbh
cation transporter; K03498 trk system potassium uptake protein TrkH
rbh
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
scnpilot_solids1_trim150_scaffold_41_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8889..10376)
|
TrkA-N domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW33_ALIDB
rbh
trka-n domain protein; K03499 trk system potassium uptake protein TrkA
rbh
TrkA domain-containing protein {ECO:0000313|EMBL:GAO25402.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
|
|
scnpilot_solids1_trim150_scaffold_41_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10394..11716)
|
gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
rbh
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
Gamma-glutamyl phosphate reductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW34_ALIDB
rbh
|
|
scnpilot_solids1_trim150_scaffold_41_9
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria
|
Not on your lists |
comp(11771..12601)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QBH7_SPILD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB36159.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
|
|
scnpilot_solids1_trim150_scaffold_41_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12717..13556)
|
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01967}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01967};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01967}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
NAD-dependent deacetylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003676319
silent information regulator protein sir2
|
|
scnpilot_solids1_trim150_scaffold_41_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13616..14662)
|
holA; DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
rbh
holA; DNA polymerase III subunit delta id=12550769 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
|
|
scnpilot_solids1_trim150_scaffold_41_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14683..15183)
|
membrane protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379DEA1
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
rare lipoprotein b; K03643 LPS-assembly lipoprotein
|
|
scnpilot_solids1_trim150_scaffold_41_13
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15189..16196)
|
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
leuS; leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
leucyl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003748B41
Suspect SCG annotation. See neighboring gene [scnpilot_solids1_trim150_scaffold_41_14].
|
|
scnpilot_solids1_trim150_scaffold_41_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16165..17901)
|
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
Leucine--tRNA ligase n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WAE1_DELAC
leucyl-tRNA synthetase-like
|
|
scnpilot_solids1_trim150_scaffold_41_15
unknown
|
Not on your lists |
18057..18380
|
This feature has no annotations |
|
scnpilot_solids1_trim150_scaffold_41_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18421..18849)
|
biopolymer transporter ExbD n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003632D50
Biopolymer transport protein {ECO:0000313|EMBL:GAD23381.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR
|
|
scnpilot_solids1_trim150_scaffold_41_17
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18851..19144)
|
Biopolymer transporter ExbB n=2 Tax=Delftia acidovorans RepID=S2WES8_DELAC
Biopolymer transporter ExbB {ECO:0000313|EMBL:EPD40170.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
biopolymer transport protein exbB-like
|
|
scnpilot_solids1_trim150_scaffold_41_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19145..19513)
|
MotA/TolQ/ExbB proton channel n=2 Tax=Alicycliphilus denitrificans RepID=E8TW48_ALIDB
mota/tolq/exbb proton channel; K03561 biopolymer transport protein ExbB
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AEB86775.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
scnpilot_solids1_trim150_scaffold_41_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19531..20346)
|
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Alicycliphilus denitrificans RepID=E8TW49_ALIDB
rbh
|
|
scnpilot_solids1_trim150_scaffold_41_20
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20398..20844)
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036E3E8E
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
smpa/omla domain-containing protein; K06186 small protein A
|
|
scnpilot_solids1_trim150_scaffold_41_21
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20945..21448
|
Fur family transcriptional regulator n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B2D6A
ferric uptake regulator family protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
Fur family ferric uptake regulator {ECO:0000313|EMBL:GAD23377.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
scnpilot_solids1_trim150_scaffold_41_22
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21458..22417)
|
HPr kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; Short=HPrK/P {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000255|HAMAP-Rule:MF_01249};; EC=2.7.4.- {ECO:0000255|HAMAP-Rule:MF_01249};; HPr(Ser) kinase/phosphorylase {ECO:0000255|HAMAP-Rule:MF_01249}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
HPr kinase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956369
rbh
|
|
scnpilot_solids1_trim150_scaffold_41_23
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22440..22907)
|
putative PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9B5_ACIAP
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:ADX48360.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
|
|
scnpilot_solids1_trim150_scaffold_41_24
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23049..24527
|
Ppx/GppA phosphatase (EC:3.6.1.40); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
rbh
exopolyphosphatase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00038207A0
rbh
Exopolyphosphatase {ECO:0000313|EMBL:GAD24842.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
scnpilot_solids1_trim150_scaffold_41_25
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24587..24937
|
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F9CE7
Uncharacterized protein {ECO:0000313|EMBL:GAD24843.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
|
|
scnpilot_solids1_trim150_scaffold_41_26
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24999..25460)
|
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
phosphohistidine phosphatase n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI000370066A
Phosphohistidine phosphatase SixA {ECO:0000313|EMBL:GAD24844.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
scnpilot_solids1_trim150_scaffold_41_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25463..27622)
|
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
polyphosphate kinase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035EFE53
rbh
|
|
scnpilot_solids1_trim150_scaffold_41_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27739..28089)
|
ribosome hibernation promoting factor n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E40C3
Ribosome-associated protein Y {ECO:0000313|EMBL:GAD23374.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sigma 54 modulation protein/ribosomal protein S30EA; K05808 putative sigma-54 modulation protein
|
|
scnpilot_solids1_trim150_scaffold_41_29
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28255..29223
|
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
rbh
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Acidovorax radicis RepID=UPI0002378699
rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
|
|
scnpilot_solids1_trim150_scaffold_41_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29213..30028)
|
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MHJ8_ACIET
hypothetical protein; K09914 putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:ACM34707.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
|