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scnpilot_solids1_trim150_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 152 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_123_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1252
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BCF24
hypothetical protein rbh
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65066.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_123_2
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1231..2124)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034BDD33
Uncharacterized protein {ECO:0000313|EMBL:KCZ58897.1}; TaxID=1280947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_123_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2203..3282)
DNA (1080bp) protein (360aa)
L-asparaginase (EC:3.5.1.1)
L-asparaginase n=1 Tax=Bacillus subtilis subsp. subtilis str. BSP1 RepID=L0CZZ1_BACIU
Asparaginase/glutaminase {ECO:0000313|EMBL:AHG93645.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
scnpilot_solids1_trim150_scaffold_123_4
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3434..4999
DNA (1566bp) protein (522aa)
peptidase S10 n=1 Tax=Sphingomonas wittichii RepID=UPI00036AC47C rbh
peptidase S10, serine carboxypeptidase rbh
Peptidase S10, serine carboxypeptidase {ECO:0000313|EMBL:ABQ69468.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
scnpilot_solids1_trim150_scaffold_123_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5080..5799)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI77675.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein id=24421161 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Pseudoxanthomonas sp. GW2 genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
scnpilot_solids1_trim150_scaffold_123_6
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6010..6411)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Burkholderia thailandensis MSMB121 RepID=N0ANQ3_BURTH
hypothetical protein
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP17851.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
scnpilot_solids1_trim150_scaffold_123_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6616..7467)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM02204.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_123_8
unknown

Not on your lists

7645..7827
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_123_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7954..9009
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90125.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9422..10237
DNA (816bp) protein (272aa)
PEP motif anchor domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQS1_9GAMM
PEP-CTERM putative exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGG90126.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10428..11312
DNA (885bp) protein (295aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ56_9GAMM
dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:AGG90127.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_12
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11407..12399
DNA (993bp) protein (331aa)
UDP-glucose 4-epimerase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] rbh
UDP-glucose 4-epimerase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GV74_THISH rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ACL73420.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
scnpilot_solids1_trim150_scaffold_123_13
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12517..13524)
DNA (1008bp) protein (336aa)
Capsular polysaccharide biosynthesis protein I; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
Capsular polysaccharide biosynthesis protein I n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7USE1_PSEUP
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_123_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13536..14867)
DNA (1332bp) protein (444aa)
nucleotide sugar dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
Nucleotide sugar dehydrogenase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAD0_NITWC
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids1_trim150_scaffold_123_15
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15132..16964)
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fruct
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Rhodanobacter denitrificans RepID=M4NAX1_9GAMM
glucosamine--fructose-6-phosphate aminotransferase, isomerizing
scnpilot_solids1_trim150_scaffold_123_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17199..18599
DNA (1401bp) protein (467aa)
Sugar transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQV4_9GAMM
sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:AGG90159.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18621..19247
DNA (627bp) protein (209aa)
Polysaccharide export protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRS8_9GAMM
periplasmic protein involved in polysaccharide export
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_123_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19275..20885
DNA (1611bp) protein (537aa)
Polysaccharide chain length determinant protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRS9_9GAMM
Polysaccharide chain length determinant protein {ECO:0000313|EMBL:EIM02171.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
polysaccharide chain length determinant protein, PEP-CTERM locus subfamily
scnpilot_solids1_trim150_scaffold_123_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20882..21796
DNA (915bp) protein (305aa)
Protein-tyrosine kinase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRT0_9GAMM
Protein-tyrosine kinase {ECO:0000313|EMBL:EIM02172.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATPase involved in chromosome partitioning
scnpilot_solids1_trim150_scaffold_123_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21797..23347
DNA (1551bp) protein (517aa)
Uncharacterized protein, PEP-CTERM system associated n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT1_9GAMM
uncharacterized protein, PEP-CTERM system associated
Uncharacterized protein, PEP-CTERM system associated {ECO:0000313|EMBL:AGG90155.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23355..24425
DNA (1071bp) protein (357aa)
Putative secretion ATPase, PEP-CTERM locus subfamily n=1 Tax=Rhodanobacter denitrificans RepID=M4NGY0_9GAMM
putative secretion ATPase, PEP-CTERM locus subfamily
Putative secretion ATPase, PEP-CTERM locus subfamily {ECO:0000313|EMBL:AGG90154.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_22
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24422..25333
DNA (912bp) protein (304aa)
Polysaccharide deacetylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQU8_9GAMM
polysaccharide deactylase family protein, PEP-CTERM locus subfamily
Polysaccharide deactylase family protein, PEP-CTERM locus subfamily {ECO:0000313|EMBL:AGG90153.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_23

Not on your lists

25347..26408
DNA (1062bp) protein (354aa)
FemAB-related protein, PEP-CTERM system-associated n=1 Tax=mine drainage metagenome RepID=T0ZWH0_9ZZZZ
FemAB-related protein, PEP-CTERM system-associated {ECO:0000313|EMBL:EQD33009.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
FemAB-related protein, PEP-CTERM system-associated
scnpilot_solids1_trim150_scaffold_123_24

Not on your lists

26411..27661
DNA (1251bp) protein (417aa)
Glycosyl transferase group 1 n=1 Tax=mine drainage metagenome RepID=T0ZEE6_9ZZZZ
Glycosyl transferase group 1 {ECO:0000313|EMBL:EQD33008.1}; Glycosyl transferase, group 1 {ECO:0000313|EMBL:EQD42597.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
sugar transferase, PEP-CTERM/EpsH1 system associated
scnpilot_solids1_trim150_scaffold_123_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27658..29232
DNA (1575bp) protein (525aa)
Exosortase 1 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRT6_9GAMM
Exosortase 1 {ECO:0000313|EMBL:EIM02178.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
eight transmembrane protein EpsH, putative exosortase
scnpilot_solids1_trim150_scaffold_123_26
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29229..30425
DNA (1197bp) protein (399aa)
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Rhodanobacter denitrificans RepID=M4NGX7_9GAMM
sugar transferase, PEP-CTERM/EpsH1 system associated
Sugar transferase, PEP-CTERM/EpsH1 system associated {ECO:0000313|EMBL:AGG90149.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_123_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30430..32385
DNA (1956bp) protein (652aa)
Asparagine synthetase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKE3_9GAMM
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:AGG90148.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
asparagine synthase, glutamine-hydrolyzing
scnpilot_solids1_trim150_scaffold_123_28
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32591..33913
DNA (1323bp) protein (441aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQU2_9GAMM
glycosyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_123_29
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34050..35255
DNA (1206bp) protein (402aa)
ATPase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRU1_9GAMM
ATPase {ECO:0000313|EMBL:EIM02183.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative ATP-grasp enzyme
scnpilot_solids1_trim150_scaffold_123_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35252..36379
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGX2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG90144.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 152 in total

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