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scnpilot_solids1_trim150_scaffold_130

Search features with annotation key words

Displaying items 61-90 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_130_60
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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62535..62861
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003716BB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD24761.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_61
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62863..64182
DNA (1320bp) protein (440aa)
conjugal transfer protein TrbL n=1 Tax=Sphingobium xenophagum RepID=UPI00037E547C rbh
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL rbh
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ABD24760.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_62
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64188..64871
DNA (684bp) protein (228aa)
conjugal transfer protein TrbF n=1 Tax=Sphingobium xenophagum RepID=UPI00036758CF rbh
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
Conjugal transfer protein {ECO:0000313|EMBL:ABD24759.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_63
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64868..65902
DNA (1035bp) protein (345aa)
conjugal transfer protein TrbG n=1 Tax=Sphingobium xenophagum RepID=UPI000362DD5C rbh
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 rbh
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ABD24758.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_64
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65899..67098
DNA (1200bp) protein (400aa)
conjugal transfer protein TraI n=1 Tax=Sphingobium xenophagum RepID=UPI000370B89A rbh
conjugation TrbI-like protein; K03195 type IV secretion system protein VirB10 rbh
Conjugation TrbI-like protein {ECO:0000313|EMBL:ABD24757.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_65
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67095..67322
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00037FAB78
hypothetical protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_solids1_trim150_scaffold_130_66
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67310..68122)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003724C51 rbh
LysR family transcriptional regulator rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_solids1_trim150_scaffold_130_67
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68764..69048
DNA (285bp) protein (95aa)
Transcriptional regulator n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AZ48_9DELT
TetR family transcriptional regulator
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_solids1_trim150_scaffold_130_68
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69045..70196
DNA (1152bp) protein (384aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteria RepID=A0R855_PELPD rbh
RND family efflux transporter MFP subunit rbh
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_solids1_trim150_scaffold_130_69
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70193..71398
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DI00_9BACT rbh
hypothetical protein; K02004 putative ABC transport system permease protein rbh
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_solids1_trim150_scaffold_130_70
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71400..72110
DNA (711bp) protein (237aa)
ABC transporter related n=2 Tax=Proteobacteria RepID=A0R853_PELPD
ABC transporter related; K02003 putative ABC transport system ATP-binding protein
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_solids1_trim150_scaffold_130_71
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72160..73569
DNA (1410bp) protein (470aa)
Beta-lactamase domain-containing protein n=1 Tax=Thauera phenylacetica B4P RepID=N6Z4I3_9RHOO
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:ENO98805.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
RNA-metabolising metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein
scnpilot_solids1_trim150_scaffold_130_72
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73569..74396
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV55_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:CDW95242.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
conserved hypothetical protein chp00730; K06966
scnpilot_solids1_trim150_scaffold_130_73
BJP_IG2102_Porphyrobacter_62_18, Porphyrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74422..75942
DNA (1521bp) protein (507aa)
RND efflux system outer membrane lipoprotein n=1 Tax=Shewanella decolorationis S12 RepID=V1DKC7_9GAMM
RND efflux system outer membrane lipoprotein
Tax=BJP_IG2102_Porphyrobacter_62_18
scnpilot_solids1_trim150_scaffold_130_74
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

75950..77200
DNA (1251bp) protein (417aa)
Uncharacterized protein n=2 Tax=Sphingomonadaceae RepID=T0HFV1_9SPHN rbh
Phospholipase A {ECO:0000313|EMBL:EXS68736.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
putative outer membrane phospholipase A rbh
scnpilot_solids1_trim150_scaffold_130_75
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77319..77579
DNA (261bp) protein (87aa)
Cupin domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBY0_9CAUL
Cupin domain protein {ECO:0000313|EMBL:EDX81724.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_130_76
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77552..77713
DNA (162bp) protein (54aa)
Mannose-1-phosphate guanylyltransferase 1 {ECO:0000313|EMBL:AKH41465.1}; EC=2.7.7.13 {ECO:0000313|EMBL:AKH41465.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Cupin domain protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBY0_9CAUL
hypothetical protein
scnpilot_solids1_trim150_scaffold_130_77
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77854..78888)
DNA (1035bp) protein (345aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA11524.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
scnpilot_solids1_trim150_scaffold_130_78
unknown

Not on your lists

78951..79148
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_130_79
unknown

Not on your lists

79227..79703
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_130_80
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79705..80028)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0H5V4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE55564.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_130_81
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80034..80372)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI0003683A30
addiction module killer protein
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_solids1_trim150_scaffold_130_82
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80411..81835)
DNA (1425bp) protein (475aa)
Integrase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GCV8_9SPHN
putative integrase
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
scnpilot_solids1_trim150_scaffold_130_83
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82232..82828)
DNA (597bp) protein (199aa)
Putative CDF-family cation efflux system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBQ8_9SPHN rbh
Cation efflux family protein {ECO:0000313|EMBL:AJA11389.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
putative CDF-family cation efflux system protein rbh
scnpilot_solids1_trim150_scaffold_130_84
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82946..86107)
DNA (3162bp) protein (1054aa)
Cobalt-zinc-cadmium resistance protein CzcA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR08_9SPHN rbh
AcrB/AcrD/AcrF family protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_130_85
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86125..87390)
DNA (1266bp) protein (422aa)
Cation efflux system protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URE7_9SPHN rbh
Cation efflux system protein {ECO:0000313|EMBL:AJA11391.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
cation efflux system protein; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_solids1_trim150_scaffold_130_86
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87387..88622)
DNA (1236bp) protein (412aa)
Outer membrane efflux protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAY4_9SPHN rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ENY80908.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
metal ion efflux outer membrane factor protein family; K15725 cobalt-zinc-cadmium resistance protein CzcC
scnpilot_solids1_trim150_scaffold_130_87
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88687..89022)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W076_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_130_88
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89072..89476)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBQ4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA11394.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_130_89
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89892..90254
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR02_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
Displaying items 61-90 of 101 in total

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