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scnpilot_solids1_trim150_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_130_trna_1
unknown

Not on your lists

17..88
DNA (72bp)
transferRNA Gly
scnpilot_solids1_trim150_scaffold_130_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(423..2726)
DNA (2304bp) protein (768aa)
putative nitric-oxide reductase; K04561 nitric oxide reductase subunit B [EC:1.7.2.5] rbh
Putative nitric-oxide reductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJT1_XANP2 rbh
Putative nitric-oxide reductase {ECO:0000313|EMBL:ABS68274.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_130_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2745..3209)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJT0_XANP2 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS68273.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_130_3
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3202..3495)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJS9_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68272.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_130_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3492..3944)
DNA (453bp) protein (151aa)
Truncated hemoglobin-like protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJS8_XANP2 rbh
hypothetical protein; K06886 hemoglobin rbh
Truncated hemoglobin-like protein {ECO:0000313|EMBL:ABS68271.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_130_5
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4025..4474
DNA (450bp) protein (150aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJS7_XANP2
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABS68270.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_130_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4830..6062
DNA (1233bp) protein (411aa)
Transposase IS4 family protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJS6_XANP2 rbh
transposase IS4 family protein rbh
Transposase IS4 family protein {ECO:0000313|EMBL:ABS68269.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
scnpilot_solids1_trim150_scaffold_130_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6485..7423
DNA (939bp) protein (313aa)
Putative ArdC antirestriction protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBE4_NOVAD rbh
ArdC antirestriction protein rbh
Putative ArdC antirestriction protein {ECO:0000313|EMBL:ABD24829.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_8
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7580..9721
DNA (2142bp) protein (714aa)
ParB family protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBE5_NOVAD rbh
ParB family protein {ECO:0000313|EMBL:ABD24828.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
ParB family protein; K03497 chromosome partitioning protein, ParB family rbh
scnpilot_solids1_trim150_scaffold_130_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9826..10299
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBE6_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD24827.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_10
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10296..11123
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBE7_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD24826.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_11
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11153..11389)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037F6376
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
scnpilot_solids1_trim150_scaffold_130_12
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11407..12465)
DNA (1059bp) protein (353aa)
permease n=1 Tax=Pseudomonas caeni RepID=UPI0003B3FC7F rbh
Permease {ECO:0000313|EMBL:KGB81406.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
permease rbh
scnpilot_solids1_trim150_scaffold_130_13
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12542..13621)
DNA (1080bp) protein (360aa)
Monooxygenase, putative n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMH4_9SPHN rbh
flavin-containing monooxygenase rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_130_14
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13623..13937)
DNA (315bp) protein (105aa)
Arsenical resistance operon repressor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MHU9_9SPHN
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_130_15
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14302..14652
DNA (351bp) protein (117aa)
Transcriptional regulator, ArsR family, ArsR1 n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIM2_9SPHN
transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_130_16
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14676..15191
DNA (516bp) protein (172aa)
Arsenate reductase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MMH8_9SPHN rbh
ArsR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_130_17
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15188..15616
DNA (429bp) protein (143aa)
ArsC-family protein (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=2 Tax=Sphingobium RepID=T0H5Q1_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_130_18
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15629..16702
DNA (1074bp) protein (358aa)
Arsenic resistance protein ArsB n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J3Z0_9SPHN
Arsenic resistance protein ArsB {ECO:0000313|EMBL:KER34728.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
arsenical-resistance protein; K03325 arsenite transporter, ACR3 family
scnpilot_solids1_trim150_scaffold_130_19
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16699..17457
DNA (759bp) protein (253aa)
Possible arsH protein n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB9_9SPHN
NADPH-dependent FMN reductase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
scnpilot_solids1_trim150_scaffold_130_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17714..22093
DNA (4380bp) protein (1460aa)
Putative methylase/helicase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBE8_NOVAD rbh
Putative methylase/helicase {ECO:0000313|EMBL:ABD24825.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
methylase/helicase rbh
scnpilot_solids1_trim150_scaffold_130_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22167..23204
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBE9_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD24824.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_22
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23539..24468
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBF0_NOVAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD24823.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_solids1_trim150_scaffold_130_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24537..25208)
DNA (672bp) protein (224aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR58_9SPHN
hypothetical protein; K03832 periplasmic protein TonB
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68424.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_130_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25259..27409)
DNA (2151bp) protein (717aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR59_9SPHN rbh
TonB dependent receptor {ECO:0000313|EMBL:GAO53109.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor-like protein; K02014 iron complex outermembrane recepter protein rbh
scnpilot_solids1_trim150_scaffold_130_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27454..28083)
DNA (630bp) protein (210aa)
Electron transport protein SCO1/SenC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W615_9SPHN
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ENY82982.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
copper chaperone SCO1/SenC family protein; K07152
scnpilot_solids1_trim150_scaffold_130_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28070..28561)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH21_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY82983.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09796 hypothetical protein
scnpilot_solids1_trim150_scaffold_130_27
unknown

Not on your lists

comp(28558..28755)
DNA (198bp) protein (66aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_130_28
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28759..29289)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL1_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66371.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_130_29
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29367..29771)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISL0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66370.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying items 1-30 of 101 in total

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