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scnpilot_solids1_trim150_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_158_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_158_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(242..745)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00037B68D0
Uncharacterized protein {ECO:0000313|EMBL:KJL21860.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_3
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

801..1556
DNA (756bp) protein (252aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rnhA; ribonuclease H (EC:3.1.26.4); K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L523_9MICO rbh
scnpilot_solids1_trim150_scaffold_158_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1576..1872
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000308D5B7
Uncharacterized protein {ECO:0000313|EMBL:KJL33777.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K09764 hypothetical protein
scnpilot_solids1_trim150_scaffold_158_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2001..2978)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F0A53B rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL26118.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_158_6
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2980..3378)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345AA44
ArsR family transcriptional regulator {ECO:0000313|EMBL:EYT57702.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_158_7
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3479..4069
DNA (591bp) protein (197aa)
Bifunctional deaminase-reductase domain-containing protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FGC5_VERMA
Deaminase/reductase {ECO:0000313|EMBL:KHD75141.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
bifunctional deaminase-reductase domain-containing protein
scnpilot_solids1_trim150_scaffold_158_8
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4079..5788)
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L0D7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ54334.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_9
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5809..6378)
DNA (570bp) protein (190aa)
Transcriptional regulator PadR family protein n=2 Tax=Microbacterium RepID=H8E684_9MICO
PadR family transcriptional regulator {ECO:0000313|EMBL:KDA04731.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_158_10
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6545..6841
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DACBB
Uncharacterized protein {ECO:0000313|EMBL:EYT60194.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
von Willebrand factor type A
scnpilot_solids1_trim150_scaffold_158_11
unknown

Not on your lists

comp(6855..7118)
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_158_12
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7314..8066)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034A39DB
Leucobacter komagatae strain VKM ST2845 L_komagatae_04, whole genome shotgun sequence {ECO:0000313|EMBL:KIP53194.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
IclR-family transcriptional regulator
scnpilot_solids1_trim150_scaffold_158_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8140..10323
DNA (2184bp) protein (728aa)
Malate synthase G {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572}; EC=2.3.3.9 {ECO:0000256|HAMAP-Rule:MF_00641, ECO:0000256|RuleBase:RU003572};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glcB; malate synthase G (EC:2.3.3.9); K01638 malate synthase [EC:2.3.3.9]
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000349FCF9 rbh
scnpilot_solids1_trim150_scaffold_158_14
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10340..11533)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034844D6
Uncharacterized protein {ECO:0000313|EMBL:EYT57929.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_158_15
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11797..12045
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYH6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KJQ54338.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_16
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12042..12434
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Streptomyces sp. BoleA5 RepID=UPI00035F46EB
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_17
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12472..13338)
DNA (867bp) protein (289aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348619D rbh
scnpilot_solids1_trim150_scaffold_158_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13335..13727)
DNA (393bp) protein (131aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
aspartate 1-decarboxylase (EC:4.1.1.11); K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BSH6_XYLCX
scnpilot_solids1_trim150_scaffold_158_19
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13727..14578)
DNA (852bp) protein (284aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
pantoate/beta-alanine ligase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1] rbh
Pantothenate synthetase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L184_9MICO rbh
scnpilot_solids1_trim150_scaffold_158_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14593..15333)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003780D17
Uncharacterized protein {ECO:0000313|EMBL:KJQ54352.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_21
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15592..16008)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B70A82
Uncharacterized protein {ECO:0000313|EMBL:KJL24532.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_22
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16008..16718)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Humibacter albus RepID=UPI0003B47254 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ54380.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16768..17940)
DNA (1173bp) protein (391aa)
Putative conserved protein UCP028408 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7X8_9MICO rbh
Putative conserved protein UCP028408 {ECO:0000313|EMBL:EIC06978.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_158_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17937..21239)
DNA (3303bp) protein (1101aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B4312A rbh
Uncharacterized protein {ECO:0000313|EMBL:EIC06977.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_158_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21236..21904)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003460B63
Uncharacterized protein {ECO:0000313|EMBL:EIC06976.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_158_26
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21901..23355)
DNA (1455bp) protein (485aa)
Methyl-accepting chemotaxis protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7X5_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC58173.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Methyl-accepting chemotaxis protein rbh
scnpilot_solids1_trim150_scaffold_158_27
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23395..23742)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V1E5_9MICC
Uncharacterized protein {ECO:0000313|EMBL:CDK00283.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
scnpilot_solids1_trim150_scaffold_158_28
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23739..24194)
DNA (456bp) protein (152aa)
Nucleotidyltransferase n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V6M2_9MICC
Putative DNA-binding protein {ECO:0000313|EMBL:CDK00284.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
DNA polymerase III subunit beta; K07075
scnpilot_solids1_trim150_scaffold_158_29
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24252..25223)
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D2FEE rbh
Sugar kinase {ECO:0000313|EMBL:KDA04735.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Carbohydrate kinase, PfkB family protein rbh
scnpilot_solids1_trim150_scaffold_158_30
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25213..28002)
DNA (2790bp) protein (930aa)
hypothetical protein n=1 Tax=Curtobacterium sp. B8 RepID=UPI00034D223E rbh
Uncharacterized protein {ECO:0000313|EMBL:EID52819.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
hypothetical protein rbh
Displaying items 1-30 of 72 in total

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