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scnpilot_solids1_trim150_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_177_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..591
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W037_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80857.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_177_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

588..1319
DNA (732bp) protein (244aa)
PepSY-associated TM helix family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBK5_9SPHN rbh
PepSY-associated TM helix family protein {ECO:0000313|EMBL:ENY80856.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
PepSY-associated TM helix family protein rbh
scnpilot_solids1_trim150_scaffold_177_3
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1326..1805)
DNA (480bp) protein (160aa)
Histidine utilization repressor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQW0_9SPHN rbh
Histidine utilization repressor {ECO:0000313|EMBL:ENY80855.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor
scnpilot_solids1_trim150_scaffold_177_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2243..2590)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00035FC6F3
Esterase/lipase-like protein {ECO:0000313|EMBL:KGB51986.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
xylanase
scnpilot_solids1_trim150_scaffold_177_5
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3061..3783
DNA (723bp) protein (241aa)
Chromate transporter n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UR97_9SPHN rbh
Chromate transporter {ECO:0000313|EMBL:ENY80854.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
chromate transporter; K07240 chromate transporter
scnpilot_solids1_trim150_scaffold_177_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3973..4491)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WAU8_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY80853.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_177_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4815..6083)
DNA (1269bp) protein (423aa)
Phage integrase family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPG2_9SPHN rbh
Phage integrase family protein {ECO:0000313|EMBL:ENY80204.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
phage integrase family protein rbh
scnpilot_solids1_trim150_scaffold_177_8
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6635..7165
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZG8_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI95750.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
scnpilot_solids1_trim150_scaffold_177_9
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7180..8037
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZG7_SPHJU rbh
ABC transporter permease {ECO:0000313|EMBL:AJR22537.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_177_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8231..8947
DNA (717bp) protein (239aa)
Conserved hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJI3_9SPHN rbh
hypothetical protein; K06890 rbh
Conserved hypothetical membrane protein {ECO:0000313|EMBL:BAK64853.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_177_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9032..9703)
DNA (672bp) protein (224aa)
UPI0003CFE27A related cluster n=1 Tax=unknown RepID=UPI0003CFE27A
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_177_12
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9720..10451)
DNA (732bp) protein (244aa)
membrane protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI00037C4436 rbh
Membrane protein {ECO:0000313|EMBL:ESZ41609.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_177_13
Mesorhizobium sp. LSJC265A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10500..10898)
DNA (399bp) protein (133aa)
UPI0003CED85D related cluster n=1 Tax=unknown RepID=UPI0003CED85D
Uncharacterized protein {ECO:0000313|EMBL:ESX10485.1}; TaxID=1287322 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC265A00.;"
scnpilot_solids1_trim150_scaffold_177_14
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10920..11210)
DNA (291bp) protein (97aa)
Nickel-resistant pritein NirB n=1 Tax=Pseudomonas fluorescens NCIMB 11764 RepID=U7DS34_PSEFL
Nickel-resistant pritein NirB {ECO:0000313|EMBL:ERP44862.1}; TaxID=1221522 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens NCIMB 11764.;"
NreA-like protein
scnpilot_solids1_trim150_scaffold_177_15
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11369..12712
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J3I7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16534.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
putative nickel resistance protein
scnpilot_solids1_trim150_scaffold_177_16
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12709..13113
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM01533.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
scnpilot_solids1_trim150_scaffold_177_17
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13168..14436
DNA (1269bp) protein (423aa)
Metal ion efflux outer membrane factor protein family protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFT4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFL44913.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
metal ion efflux outer membrane factor protein family protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
scnpilot_solids1_trim150_scaffold_177_18
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14433..15584
DNA (1152bp) protein (384aa)
Metal transporter n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HJK5_9SPHN rbh
Metal transporter {ECO:0000313|EMBL:EQB16531.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
metal ion efflux membrane fusion protein family
scnpilot_solids1_trim150_scaffold_177_19
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15581..18817
DNA (3237bp) protein (1079aa)
Cation transporter n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IXA9_9SPHN
Cation transporter {ECO:0000313|EMBL:EQB16530.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
heavy metal efflux pump CzcA; K07239 heavy-metal exporter, HME family rbh
scnpilot_solids1_trim150_scaffold_177_20
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18884..19216
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPY6_SPHAL
hypothetical protein; K09137 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF54286.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
scnpilot_solids1_trim150_scaffold_177_21
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19247..19729
DNA (483bp) protein (161aa)
UPI0003D5F3D6 related cluster n=1 Tax=unknown RepID=UPI0003D5F3D6
Uncharacterized protein {ECO:0000313|EMBL:ETI62705.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_177_22
unknown

Not on your lists

19866..20225
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_177_23
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20475..21188)
DNA (714bp) protein (238aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJN2_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_177_24
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21206..21931)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJN3_9SPHN rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_177_25
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22179..22550)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KGB53754.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
scnpilot_solids1_trim150_scaffold_177_26
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22996..23994)
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00036976DE rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ93530.1}; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
scnpilot_solids1_trim150_scaffold_177_27
Hyphomonas johnsonii, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24010..24699)
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ86939.1}; Flags: Fragment;; TaxID=1280950 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas johnsonii MHS-2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_177_28
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25145..27844
DNA (2700bp) protein (900aa)
TonB-dependent receptor n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SV13_CAUSK
TonB-dependent receptor {ECO:0000313|EMBL:KGB56036.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_177_29
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..28740
DNA (756bp) protein (252aa)
Transcriptional regulator, histidine utilization repressor, GntR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQF6_SPHAL
histidine utilization repressor; K05836 GntR family transcriptional regulator, histidine utilization repressor
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
scnpilot_solids1_trim150_scaffold_177_30
unknown

Not on your lists

comp(28617..29051)
DNA (435bp) protein (145aa)

This feature has no annotations

Displaying items 1-30 of 63 in total

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