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scnpilot_solids1_trim150_scaffold_198

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_198_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1570)
DNA (1569bp) protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Chemotaxis protein histidine kinase-like protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBL0_9GAMM
chemotaxis protein histidine kinase-like protein
scnpilot_solids1_trim150_scaffold_198_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1931..2293)
DNA (363bp) protein (121aa)
Fis family transcriptional regulator n=1 Tax=Dyella ginsengisoli RepID=UPI000348FA4A
Fis family transcriptional regulator {ECO:0000313|EMBL:AHX14342.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; K03413 two-component system, chemotaxis family, response regulator CheY
scnpilot_solids1_trim150_scaffold_198_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2314..2637)
DNA (324bp) protein (108aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Rhodanobacter denitrificans RepID=M4NGI3_9GAMM
anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:AGG90045.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_198_4
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2884..6174
DNA (3291bp) protein (1097aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00037444C2 rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACT51966.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
scnpilot_solids1_trim150_scaffold_198_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6280..7590
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBK7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV29721.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
Flagellar hook-length control protein FliK
scnpilot_solids1_trim150_scaffold_198_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7587..7850
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYS4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV29665.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_198_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8063..8428)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FED5ED
Uncharacterized protein {ECO:0000313|EMBL:AIF49159.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_198_8
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8637..9899)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002E51D4D
Uncharacterized protein {ECO:0000313|EMBL:KJV36271.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
putative signal transduction protein containing EAL and modified HD-GYP domains
scnpilot_solids1_trim150_scaffold_198_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9920..10363)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000347AA97
flagellar biosynthesis/type III secretory pathway chaperone
Flagellar biosynthesis/type III secretory pathway chaperone {ECO:0000313|EMBL:AGG90095.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_198_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10365..10673)
DNA (309bp) protein (103aa)
Anti-sigma-28 factor FlgM n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ3_9GAMM
flagellar biosynthesis anti-sigma factor FlgM
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:AGG90094.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_198_11
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10778..11470)
DNA (693bp) protein (231aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ2_9GAMM
Flagella basal body P-ring formation protein FlgA {ECO:0000256|RuleBase:RU362063}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
flagella basal body P-ring formation protein FlgA
scnpilot_solids1_trim150_scaffold_198_12
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11467..12774)
DNA (1308bp) protein (436aa)
Methyl-accepting chemotaxis protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYF2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJV36273.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
methyl-accepting chemotaxis protein
scnpilot_solids1_trim150_scaffold_198_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12953..13882
DNA (930bp) protein (310aa)
Chemotaxis signal transduction protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NRA2_9GAMM
Chemotaxis protein {ECO:0000313|EMBL:KJV36274.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
chemotaxis signal transduction protein
scnpilot_solids1_trim150_scaffold_198_14
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14048..14464
DNA (417bp) protein (139aa)
Flagellar basal body rod protein FlgB n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP9_9GAMM
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar basal-body rod protein FlgB
scnpilot_solids1_trim150_scaffold_198_15
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14464..14895
DNA (432bp) protein (144aa)
flagellar basal body rod protein FlgC n=1 Tax=Dyella japonica RepID=UPI0002FBC5E8
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
flagellar basal-body rod protein FlgC
scnpilot_solids1_trim150_scaffold_198_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14901..15551
DNA (651bp) protein (217aa)
Flagellar hook capping protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NK87_9GAMM
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AGG90088.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_198_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15807..17027
DNA (1221bp) protein (407aa)
Flagellar hook protein FlgE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE7_9GAMM
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAN45489.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar hook-basal body protein
scnpilot_solids1_trim150_scaffold_198_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17054..17794
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=2 Tax=Rhodanobacter denitrificans RepID=M4NR97_9GAMM
Flagellar basal body rod protein FlgF {ECO:0000313|EMBL:GAN45488.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar basal-body rod protein FlgF
scnpilot_solids1_trim150_scaffold_198_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17860..18645
DNA (786bp) protein (262aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Rhodanobacter denitrificans RepID=M4NGL5_9GAMM
flagellar basal-body rod protein FlgG
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:AGG90085.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_198_20
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18821..19471
DNA (651bp) protein (217aa)
Flagellar L-ring protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR4_9GAMM
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar basal body L-ring protein
scnpilot_solids1_trim150_scaffold_198_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19471..20649
DNA (1179bp) protein (393aa)
Flagellar P-ring protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE3_9GAMM
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar basal-body P-ring protein
scnpilot_solids1_trim150_scaffold_198_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20652..21731
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000346FD71
Flagellar rod assembly protein/muramidase FlgJ {ECO:0000313|EMBL:EIM02232.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar rod assembly protein/muramidase FlgJ
scnpilot_solids1_trim150_scaffold_198_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21759..23618
DNA (1860bp) protein (620aa)
Flagellar hook-associated protein FlgK n=1 Tax=Rhodanobacter denitrificans RepID=M4NR90_9GAMM
flagellar hook-associated protein FlgK
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:AGG90081.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_198_24
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23621..24808
DNA (1188bp) protein (396aa)
Flagellar hook-associated protein 3 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ2_9GAMM
Flagellar hook protein {ECO:0000313|EMBL:GAN45483.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar hook-associated protein 3
scnpilot_solids1_trim150_scaffold_198_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25187..26623
DNA (1437bp) protein (479aa)
Flagellin domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ3_9GAMM
Flagellin domain-containing protein {ECO:0000313|EMBL:EIM02235.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellin/flagellar hook associated protein
scnpilot_solids1_trim150_scaffold_198_26
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26933..28348
DNA (1416bp) protein (472aa)
Flagellar hook-associated protein 2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ4_9GAMM
Flagellar hook protein {ECO:0000313|EMBL:GAN45481.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
flagellar capping protein
scnpilot_solids1_trim150_scaffold_198_27
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28379..28807
DNA (429bp) protein (143aa)
Flagellar biosynthetic protein FliS n=1 Tax=Rhodanobacter denitrificans RepID=I4WQN6_9GAMM
flagellar biosynthetic protein FliS
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_198_28
unknown

Not on your lists

28807..29097
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_198_29
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29149..29715
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031CB029
Uncharacterized protein {ECO:0000313|EMBL:KJV36288.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_198_30
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29991..31397
DNA (1407bp) protein (469aa)
Sigma-54 interacting regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYD2_9GAMM
Sigma-54 interacting regulator {ECO:0000313|EMBL:EIL92223.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Displaying items 1-30 of 67 in total

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