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scnpilot_solids1_trim150_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_222_1
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1464
DNA (1464bp) protein (488aa)
aspartate kinase (EC:4.1.1.20 2.7.2.4)
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WLZ5_9GAMM
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_222_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1485..2846
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC67_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97058.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_222_3
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3600..4958
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NH31_9GAMM
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_222_4
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5257..6513
DNA (1257bp) protein (419aa)
Major facilitator superfamily protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIM0_9GAMM
Major facilitator superfamily protein {ECO:0000313|EMBL:EIL87061.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
nitrate/nitrite transporter
scnpilot_solids1_trim150_scaffold_222_5
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6541..9726)
DNA (3186bp) protein (1062aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMD9_RUNSL rbh
Glycosyl hydrolase BNR repeat-containing protein {ECO:0000313|EMBL:AEI50577.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
glycosyl hydrolase BNR repeat-containing protein rbh
scnpilot_solids1_trim150_scaffold_222_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9904..12774)
DNA (2871bp) protein (957aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFT1_9GAMM
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:EIL98322.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
outer membrane receptor for ferrienterochelin and colicins
scnpilot_solids1_trim150_scaffold_222_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13449..17243)
DNA (3795bp) protein (1265aa)
Pathogenicity protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WM01_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AGG90257.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_222_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17247..19016)
DNA (1770bp) protein (590aa)
Outer membrane protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NH26_9GAMM
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AGG90255.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_222_9
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19118..21739)
DNA (2622bp) protein (874aa)
Putative Beta-(1-3)-glucosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVY3_9GAMM
Putative Beta-(1-3)-glucosyl transferase {ECO:0000313|EMBL:EIL91374.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
exo-beta-1,3-glucanase
scnpilot_solids1_trim150_scaffold_222_10
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21904..22722)
DNA (819bp) protein (273aa)
inositol monophosphatase (EC:3.1.3.25)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Caulobacter sp. AP07 RepID=J3AM88_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFN49452.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
scnpilot_solids1_trim150_scaffold_222_11
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22727..24073)
DNA (1347bp) protein (449aa)
Sugar phosphate permease n=1 Tax=Caulobacter sp. AP07 RepID=J2GSC9_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFN49453.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
sugar phosphate permease
scnpilot_solids1_trim150_scaffold_222_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24168..25664)
DNA (1497bp) protein (499aa)
iolA; malonate-semialdehyde dehydrogenase IolA; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Malonate-semialdehyde dehydrogenase IolA n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4I8_CAUCN
Methylmalonate-semialdehyde dehydrogenase, putative {ECO:0000313|EMBL:AAK23283.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
scnpilot_solids1_trim150_scaffold_222_13
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25668..26489)
DNA (822bp) protein (274aa)
iolB; myo-inositol catabolism protein IolB; K03337 5-deoxy-glucuronate isomerase [EC:5.3.1.-]
5-deoxyglucuronate isomerase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000363A8D6
IolB protein {ECO:0000313|EMBL:AAK23282.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
scnpilot_solids1_trim150_scaffold_222_14
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26489..27379)
DNA (891bp) protein (297aa)
iolE; myo-inositol catabolism protein IolE; K03335 inosose dehydratase [EC:4.2.1.44]
Myo-inositol catabolism protein IolE n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H4I6_CAUCN
IolE protein {ECO:0000313|EMBL:AAK23281.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus (strain ATCC 19089 / CB15).;"
scnpilot_solids1_trim150_scaffold_222_15
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27376..29208)
DNA (1833bp) protein (611aa)
iolD protein; K03336 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [EC:3.7.1.-]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00037854EC
Uncharacterized protein {ECO:0000313|EMBL:KFN49457.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
scnpilot_solids1_trim150_scaffold_222_16
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29210..31147)
DNA (1938bp) protein (646aa)
iolC; 5-dehydro-2-deoxygluconokinase IolC (EC:2.7.1.92); K03338 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
Uncharacterized protein n=1 Tax=Caulobacter sp. AP07 RepID=J2GSD5_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EJL33310.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
scnpilot_solids1_trim150_scaffold_222_17
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31235..32209)
DNA (975bp) protein (325aa)
Transcriptional regulator n=1 Tax=Caulobacter sp. AP07 RepID=J3AKR1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KFN49459.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
SIS domain-containing protein
scnpilot_solids1_trim150_scaffold_222_18
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32310..33275
DNA (966bp) protein (322aa)
idhA; myo-inositol 2-dehydrogenase IdhA (EC:1.1.1.18); K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
inositol 2-dehydrogenase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000376C8EC
Uncharacterized protein {ECO:0000313|EMBL:KFN49460.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
scnpilot_solids1_trim150_scaffold_222_19
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33268..34245
DNA (978bp) protein (326aa)
myo-inositol 2-dehydrogenase; K00010 myo-inositol 2-dehydrogenase [EC:1.1.1.18]
inositol 2-dehydrogenase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI000376C8EC
Uncharacterized protein {ECO:0000313|EMBL:KFN49461.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
scnpilot_solids1_trim150_scaffold_222_20
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34544..35674)
DNA (1131bp) protein (377aa)
phosphoanhydride phosphohydrolase; K01093 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
histidine acid phosphatase n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI000372B511
Uncharacterized protein {ECO:0000313|EMBL:ENZ79541.1}; Flags: Precursor;; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
scnpilot_solids1_trim150_scaffold_222_21
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36091..38400)
DNA (2310bp) protein (770aa)
hypothetical protein, partial n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI0003730D8A
Ferripyoverdine receptor {ECO:0000313|EMBL:AJC47707.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
scnpilot_solids1_trim150_scaffold_222_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38852..40570
DNA (1719bp) protein (573aa)
Peptidase S53 propeptide n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP4_9GAMM
Peptidase S53 propeptide {ECO:0000313|EMBL:EIL97235.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
kumamolisin; K08677 kumamolisin rbh
scnpilot_solids1_trim150_scaffold_222_23
unknown

Not on your lists

40567..40809
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_222_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40847..41083
DNA (237bp) protein (79aa)
ATP-binding region, ATPase-like protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ41_9GAMM
ATP-binding region, ATPase-like protein {ECO:0000313|EMBL:EIL89332.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
helix-turn-helix, type 11 domain-containing protein
scnpilot_solids1_trim150_scaffold_222_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41252..41929
DNA (678bp) protein (226aa)
Semialdehyde dehydrogenase NAD-binding protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WWM4_PSEUU
semialdehyde dehydrogenase NAD - binding protein
Semialdehyde dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADV28573.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_222_26
Gammaproteobacteria bacterium BRH_c0, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41992..42219
DNA (228bp) protein (76aa)
Anti-toxin protein n=1 Tax=mine drainage metagenome RepID=E6PNJ2_9ZZZZ
CopG family transcriptional regulator {ECO:0000313|EMBL:KJS08037.1}; TaxID=1629722 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium BRH_c0.;"
anti-toxin protein
scnpilot_solids1_trim150_scaffold_222_27
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42188..42472
DNA (285bp) protein (95aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTK3_PARL1
addiction module antitoxin; K06218 RelE protein
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:ABS63236.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids1_trim150_scaffold_222_28
unknown

Not on your lists

42509..42715
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_222_29
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42738..43940)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W641_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94932.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_222_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43969..45618)
DNA (1650bp) protein (550aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C43B2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87424.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 46 in total

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