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scnpilot_solids1_trim150_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_233_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..247)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VDM053 RepID=R8PQT8_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOP60917.1}; TaxID=1053249 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VDM053.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_233_2
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(259..1356)
DNA (1098bp) protein (366aa)
AAA ATPase, central domain protein n=2 Tax=Flavobacterium RepID=A5FFF0_FLAJ1 rbh
ATPase central domain-containing protein rbh
ATPase central domain-containing protein {ECO:0000313|EMBL:EJG02183.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
scnpilot_solids1_trim150_scaffold_233_3
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1758..2693)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N0K2_9BACT
HNH endonuclease {ECO:0000313|EMBL:GAN32858.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
HNH endonuclease; K07454 putative restriction endonuclease
scnpilot_solids1_trim150_scaffold_233_4
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2736..3989)
DNA (1254bp) protein (418aa)
HipA domain-containing protein; K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] rbh
HipA domain protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SQ26_9FLAO rbh
HipA domain protein {ECO:0000313|EMBL:AEE49527.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_233_5
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4001..4291)
DNA (291bp) protein (97aa)
Helix-turn-helix domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L0P6_HALH1
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEE49528.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids1_trim150_scaffold_233_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4848..6800)
DNA (1953bp) protein (651aa)
Type IV secretory pathway VirD4 components-like protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDX4_9SPHI
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIC89903.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
type IV secretory pathway VirD4 components-like protein
scnpilot_solids1_trim150_scaffold_233_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6818..8095)
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DA900
Uncharacterized protein {ECO:0000313|EMBL:KIC89902.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
relaxase/mobilization nuclease
scnpilot_solids1_trim150_scaffold_233_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8080..8475)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C29EA
Uncharacterized protein {ECO:0000313|EMBL:KIC89901.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_233_9
unknown

Not on your lists

8876..9139
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_233_10
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9168..9869)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034952F2
Metal-dependent hydrolase {ECO:0000313|EMBL:AJR03561.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC-SAMT-1.;"
metal-dependent hydrolase
scnpilot_solids1_trim150_scaffold_233_11
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9869..13093)
DNA (3225bp) protein (1075aa)
hsdR; type I restriction-modification system, R subunit (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Uncharacterized protein n=2 Tax=Rhodonellum RepID=U5BR12_9BACT rbh
Restriction endonuclease subunit R {ECO:0000313|EMBL:KGO80770.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
scnpilot_solids1_trim150_scaffold_233_12

Not on your lists

comp(13093..13644)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQI2_METAC
hypothetical protein
Marine sediment metagenome DNA, contig: S01H4_S07406 {ECO:0000313|EMBL:GAG97629.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_233_13
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13705..14700)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I2U9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10456.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_233_14
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14731..15498)
DNA (768bp) protein (256aa)
adenylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037BFA3E
Uncharacterized protein {ECO:0000313|EMBL:EJF54975.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
scnpilot_solids1_trim150_scaffold_233_15
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15501..16268)
DNA (768bp) protein (256aa)
putative adenylate or guanylate cyclase (EC:4.6.1.1)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037BFA3E
Uncharacterized protein {ECO:0000313|EMBL:EJF54975.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
scnpilot_solids1_trim150_scaffold_233_16
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16287..17525)
DNA (1239bp) protein (413aa)
Type I restriction modification DNA specificity domain protein n=2 Tax=Escherichia coli RepID=E2X1N6_ECOLX
restriction modification system DNA specificity domain-containing protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
scnpilot_solids1_trim150_scaffold_233_17
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17599..19128)
DNA (1530bp) protein (510aa)
type I restriction system adenine methylase (hsdM) (EC:2.1.1.72) rbh
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZN7_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ERM83029.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
scnpilot_solids1_trim150_scaffold_233_18
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19134..19691)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BR14_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGO80777.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
type I restriction-modification system, specificity subunit S HsdS
scnpilot_solids1_trim150_scaffold_233_19
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19976..21040)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003790A84
phage/plasmid-related protein tigr03299
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids1_trim150_scaffold_233_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21083..21466)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003683509
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
single stranded DNA-binding protein
scnpilot_solids1_trim150_scaffold_233_21
unknown

Not on your lists

comp(21484..21687)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_233_22
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22346..23194
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA90332.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
scnpilot_solids1_trim150_scaffold_233_23
unknown

Not on your lists

comp(23264..23431)
DNA (168bp) protein (56aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_233_24
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23519..23761
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W077_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36038.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
scnpilot_solids1_trim150_scaffold_233_25
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23767..24651
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W078_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36039.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_233_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24652..25806)
DNA (1155bp) protein (385aa)
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase IV n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL26_NIAKG
scnpilot_solids1_trim150_scaffold_233_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25806..28763)
DNA (2958bp) protein (986aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] rbh
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL27_NIAKG rbh
scnpilot_solids1_trim150_scaffold_233_28
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

29408..30379
DNA (972bp) protein (324aa)
Transcriptional regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZEX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIF28365.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transcriptional regulator, AraC family
scnpilot_solids1_trim150_scaffold_233_29
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30477..30938
DNA (462bp) protein (154aa)
Putative membrane protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YZV2_AEQSU
Uncharacterized protein {ECO:0000313|EMBL:KFF09830.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_233_30
unknown

Not on your lists

30973..31266
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying items 1-30 of 52 in total

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