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scnpilot_solids1_trim150_scaffold_281

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_281_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DE49F
two component heavy metal response transcriptional regulator
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_281_2
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285..611
DNA (327bp) protein (109aa)
Multi-Cu oxidase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGA5_METPP
copA1; multi-Cu oxidase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
scnpilot_solids1_trim150_scaffold_281_3
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

608..2062
DNA (1455bp) protein (485aa)
Outer membrane efflux protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7J7_9BURK
outer membrane efflux protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
scnpilot_solids1_trim150_scaffold_281_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2135..3547
DNA (1413bp) protein (471aa)
Putative multicopper oxidase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMH2_9BURK
Putative multicopper oxidase {ECO:0000313|EMBL:EHR73137.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
multicopper oxidase type 3 rbh
scnpilot_solids1_trim150_scaffold_281_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3575..4087
DNA (513bp) protein (171aa)
Putative copper-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJN1_VARPD
putative copper-binding protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACS22275.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids1_trim150_scaffold_281_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4124..4459
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2M0V6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL91338.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_281_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4507..4725)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E9239
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_281_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4963..5400
DNA (438bp) protein (146aa)
hypothetical protein id=12497695 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_281_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5523..5747
DNA (225bp) protein (75aa)
Conserved hypothetical secreted protein id=1351592 bin=GWE1_T_denit_62_9 species=Azoarcus sp. genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_281_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5780..6265
DNA (486bp) protein (162aa)
hypothetical protein id=12497693 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_281_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6324..6593
DNA (270bp) protein (90aa)
hypothetical protein id=1351594 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_281_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6757..7221
DNA (465bp) protein (155aa)
Putative uncharacterized protein id=1351595 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_281_13
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7297..7551
DNA (255bp) protein (85aa)
id=4961696 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
scnpilot_solids1_trim150_scaffold_281_14
unknown

Not on your lists

7548..7676
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_281_15
unknown

Not on your lists

7658..7789
DNA (132bp) protein (44aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_281_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7953..8180
DNA (228bp) protein (76aa)
Uncharacterized protein id=1351596 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
rhodanese-like protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_281_17
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8405..8800
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F33E8
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids1_trim150_scaffold_281_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8869..9180
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00036CBF2C
response regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_solids1_trim150_scaffold_281_19
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9335..9814
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000367BFF5
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids1_trim150_scaffold_281_20
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9801..10043
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVW3_POLNA
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
scnpilot_solids1_trim150_scaffold_281_21
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10040..10696
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IN67_9BURK rbh
isoprenylcysteine carboxyl methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids1_trim150_scaffold_281_22
uncultured Aquificae bacterium, Aquificae, Aquificae, Bacteria

Not on your lists

10732..11967
DNA (1236bp) protein (412aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=uncultured Aquificae bacterium RepID=H5SDT9_9BACT rbh
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:BAL54325.1}; TaxID=453415 species="Bacteria; Aquificae; environmental samples.;" source="uncultured Aquificae bacterium.;"
oxidoreductase molybdopterin binding protein rbh
scnpilot_solids1_trim150_scaffold_281_23
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

11981..12256
DNA (276bp) protein (92aa)
Sulfite dehydrogenase (Cytochrome) subunit SorB n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DHG5_HYDTT
sorB; sulfite:cytochrome c oxidoreductase subunit B
Sulfite:cytochrome c oxidoreductase subunit B {ECO:0000313|EMBL:BAI69267.1}; TaxID=608538 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
scnpilot_solids1_trim150_scaffold_281_24
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12285..13424
DNA (1140bp) protein (380aa)
acetate kinase (EC:2.7.2.1); K00925 acetate kinase [EC:2.7.2.1]
Acetate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DV49_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids1_trim150_scaffold_281_25
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13421..15850
DNA (2430bp) protein (810aa)
phosphoketolase (EC:4.1.2.22); K01632 fructose-6-phosphate phosphoketolase [EC:4.1.2.22] rbh
Probable phosphoketolase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK61_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
scnpilot_solids1_trim150_scaffold_281_26
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15847..16584
DNA (738bp) protein (246aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=1 Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DU68_THIND rbh
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein rbh
Tax=RBG_16_Gammaproteobacteria_62_13__curated
scnpilot_solids1_trim150_scaffold_281_27
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16607..17086
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000368FA6E
YHS domain-containing protein
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_solids1_trim150_scaffold_281_28
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17215..17409
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YZC6_9ALTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHJ02430.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_281_29
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17421..17681
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FV92_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERJ19839.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_281_30
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17686..19896
DNA (2211bp) protein (737aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
Glycogen debranching enzyme GlgX n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C079_NITHN rbh
Displaying items 1-30 of 56 in total

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