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scnpilot_solids1_trim150_scaffold_297

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_297_1
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..201
DNA (201bp) protein (67aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AJZ56232.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AJZ56232.1};; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
heavy metal translocating P-type ATPase (EC:3.6.3.4)
Heavy metal translocating P-type ATPase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Y9T0_9ZZZZ
scnpilot_solids1_trim150_scaffold_297_2
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

279..506
DNA (228bp) protein (76aa)
Heavy metal translocating P-type ATPase n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EHN8_9BURK
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EKZ98845.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
scnpilot_solids1_trim150_scaffold_297_3
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

563..1117
DNA (555bp) protein (185aa)
Putative MerR family regulatory protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EGY6_9BURK
MerR regulatory family protein {ECO:0000313|EMBL:AJZ56316.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
putative MerR family regulatory protein
scnpilot_solids1_trim150_scaffold_297_4
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1133..1405
DNA (273bp) protein (91aa)
Thioredoxin/glutaredoxin n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EIV9_9BURK
Glutaredoxin family protein {ECO:0000313|EMBL:AJZ56031.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
thioredoxin/glutaredoxin
scnpilot_solids1_trim150_scaffold_297_5
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1479..2174
DNA (696bp) protein (232aa)
Putative cytochrome c biogenesis protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VHX3_9GAMM
Putative cytochrome c biogenesis protein {ECO:0000313|EMBL:EIL86814.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
cytochrome c biogenesis protein, transmembrane region
scnpilot_solids1_trim150_scaffold_297_6
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2214..3428
DNA (1215bp) protein (405aa)
Major facilitator transporter n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EDN3_9BURK
Major facilitator transporter {ECO:0000313|EMBL:EKZ97450.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_297_7
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4073..4333
DNA (261bp) protein (87aa)
Transposase for transposon Tn4556 n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZPW9_9ALTE
Transposase for transposon Tn4556 {ECO:0000313|EMBL:GAC32312.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola polaris LMG 21857.;"
transposase
scnpilot_solids1_trim150_scaffold_297_8
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4388..4597
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWP3_9GAMM
Transposase, TnpA family {ECO:0000313|EMBL:EXI90282.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
transposase
scnpilot_solids1_trim150_scaffold_297_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4594..6279)
DNA (1686bp) protein (562aa)
putative mercuric reductase; K00520 mercuric reductase [EC:1.16.1.1]
Mercuric reductase {ECO:0000256|RuleBase:RU361223}; EC=1.16.1.1 {ECO:0000256|RuleBase:RU361223};; Hg(II) reductase {ECO:0000256|RuleBase:RU361223}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
Mercuric reductase n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UEZ3_RALPJ
scnpilot_solids1_trim150_scaffold_297_10
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6307..6582)
DNA (276bp) protein (92aa)
MerP (Fragment) n=1 Tax=Escherichia coli RepID=Q93M27_ECOLX
mercury resistance operon protein MerP
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
scnpilot_solids1_trim150_scaffold_297_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6596..6946)
DNA (351bp) protein (117aa)
Mercuric transport protein n=29 Tax=Proteobacteria RepID=MERT_SERMA
merT; mercuric transport protein; K08363 mercuric ion transport protein
Mercuric transport protein {ECO:0000313|EMBL:EZE21858.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
scnpilot_solids1_trim150_scaffold_297_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7018..7425
DNA (408bp) protein (136aa)
Regulatory protein id=1311318 bin=GWE1_T_denit_62_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative transcriptional regulator MerR; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_297_13
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7431..8384)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003693771 rbh
hypothetical protein; K09144 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF08445.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids1_trim150_scaffold_297_14
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8381..9118)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LN32_RALME rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABF08444.2}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids1_trim150_scaffold_297_15
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9213..9473)
DNA (261bp) protein (87aa)
conjugal transfer protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036D4AA9
(protein belongs to CMGI-3)
Uncharacterized protein {ECO:0000313|EMBL:ABF08443.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
scnpilot_solids1_trim150_scaffold_297_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9470..10750)
DNA (1281bp) protein (427aa)
TrbI-like protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YQL3_PSEAI rbh
Conjugal transfer protein TrbI {ECO:0000313|EMBL:KGE69514.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
conjugation trbi family protein rbh
scnpilot_solids1_trim150_scaffold_297_17
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10753..11745)
DNA (993bp) protein (331aa)
Conjugative transfer protein TrbG n=1 Tax=Pandoraea sp. RB-44 RepID=V5UI06_9BURK rbh
Conjugative transfer protein TrbG {ECO:0000313|EMBL:AHB76862.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9 rbh
scnpilot_solids1_trim150_scaffold_297_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11742..12446)
DNA (705bp) protein (235aa)
Conjugal transfer protein TrbF n=3 Tax=Pseudomonas aeruginosa RepID=U8EG63_PSEAI
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KGE69516.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 rbh
scnpilot_solids1_trim150_scaffold_297_19
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12459..13811)
DNA (1353bp) protein (451aa)
Conjugative transfer protein TrbL n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FJT5_STEMA rbh
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:KGB99490.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
TrbL/VirB6 plasmid conjugal transfer protein; K07344 type IV secretion system protein TrbL rbh
scnpilot_solids1_trim150_scaffold_297_20
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13808..14101)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YQV1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHC89224.1}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas monteilii SB3101.;"
lipoprotein
scnpilot_solids1_trim150_scaffold_297_21
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14113..14841)
DNA (729bp) protein (243aa)
Conjugative transfer protein TrbJ n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3G9S9_STEMA rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:KGC11636.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
P-type conjugative transfer protein TrbJ rbh
scnpilot_solids1_trim150_scaffold_297_22
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14838..17288)
DNA (2451bp) protein (817aa)
Conjugal transfer protein TrbE n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UXD4_PSEAI rbh
CagE, TrbE, VirB , component of type IV transporter system family protein {ECO:0000313|EMBL:KGC11472.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
ATPase rbh
scnpilot_solids1_trim150_scaffold_297_23
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17304..17573)
DNA (270bp) protein (90aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8EG58_PSEAI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KGE69521.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
Conjugal transfer trbD transmembrane protein
scnpilot_solids1_trim150_scaffold_297_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17570..17953)
DNA (384bp) protein (128aa)
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YYQ9_PSEAI
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KGE69522.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
trbC; Conjugative transfer protein TrbC; K03197 type IV secretion system protein VirB2
scnpilot_solids1_trim150_scaffold_297_25
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17950..18978)
DNA (1029bp) protein (343aa)
P-type conjugative transfer ATPase TrbB n=2 Tax=Burkholderia multivorans RepID=B9BUE4_9BURK rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EEE05441.1}; TaxID=513052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD2.;"
P-type conjugative transfer ATPase TrbB rbh
scnpilot_solids1_trim150_scaffold_297_26
Pseudomonas monteilii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18975..19439)
DNA (465bp) protein (155aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8EGU1_PSEAI
CopG family transcripitonal regulator {ECO:0000313|EMBL:AHC89230.1}; TaxID=1435058 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas monteilii SB3101.;"
CopG family transcriptional regulator
scnpilot_solids1_trim150_scaffold_297_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19436..21430)
DNA (1995bp) protein (665aa)
Conjugal transfer coupling protein TraG n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YUQ6_PSEAI rbh
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGE69525.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 rbh
scnpilot_solids1_trim150_scaffold_297_28
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21652..21933)
DNA (282bp) protein (94aa)
Putative lipoprotein n=1 Tax=Ralstonia solanacearum SD54 RepID=V5AAE7_RALSL
Uncharacterized protein {ECO:0000313|EMBL:KGE69527.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
lipoprotein
scnpilot_solids1_trim150_scaffold_297_29
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21930..22874)
DNA (945bp) protein (315aa)
Transcriptional regulator, LysR family n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UB72_RALSL rbh
Transcriptional regulator, LysR family rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGH83638.1}; TaxID=1262456 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum FQY_4.;"
scnpilot_solids1_trim150_scaffold_297_30
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23032..23232
DNA (201bp) protein (67aa)
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003774AF7
Excisionase {ECO:0000313|EMBL:KGP03311.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
excision promoter, Xis
Displaying items 1-30 of 60 in total

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