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scnpilot_solids1_trim150_scaffold_360

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_360_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..645
DNA (645bp) protein (215aa)
two component heavy metal response transcriptional regulator id=12498652 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
two component heavy metal response transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_360_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

642..2036
DNA (1395bp) protein (465aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Thiobacillus thioparus RepID=UPI00036FC468 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_360_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2084..2497
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ84_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97283.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_360_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2591..3880
DNA (1290bp) protein (430aa)
cobalt-zinc-cadmium resistance protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CCF61 rbh
cobalt-zinc-cadmium outer membrane resistance protein; K15725 cobalt-zinc-cadmium resistance protein CzcC rbh
Probable cobalt-zinc-cadmium outer membrane resistance protein {ECO:0000313|EMBL:AAZ97282.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_360_5
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3889..5418
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A868C rbh
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB rbh
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_solids1_trim150_scaffold_360_6
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5428..5769
DNA (342bp) protein (114aa)
Nitrogen regulatory protein P-II n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI5_GALCS
nitrogen regulatory protein P-II
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_solids1_trim150_scaffold_360_7
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5784..8927
DNA (3144bp) protein (1048aa)
cation transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003699D2E rbh
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
Tax=GWA2_Rhodocyclales_65_20_curated
scnpilot_solids1_trim150_scaffold_360_8
unknown

Not on your lists

8975..9364
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FAE91
scnpilot_solids1_trim150_scaffold_360_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9706..10002)
DNA (297bp) protein (99aa)
Histone-like DNA-binding protein id=1317127 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_360_10
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10298..12748)
DNA (2451bp) protein (817aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodospirillum rubrum F11 RepID=G2T7V5_RHORU rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) rbh
Tax=RBG_16_Gammaproteobacteria_62_13__curated
scnpilot_solids1_trim150_scaffold_360_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12798..12998)
DNA (201bp) protein (67aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00035F78AD
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_360_12
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13581..13820)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AHL1_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34009.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_solids1_trim150_scaffold_360_13
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13832..14248)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6A9F3_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN34010.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_solids1_trim150_scaffold_360_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14306..14896)
DNA (591bp) protein (197aa)
TetR family transcriptional regulator n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AE55_9PROT
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:BAN34011.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_solids1_trim150_scaffold_360_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15264..17189
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B185C rbh
integrase family protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_360_16
R_Gammaproteobacteria_38_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17255..18316)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Legionella pneumophila subsp. pneumophila RepID=I7HNC7_LEGPN rbh
hypothetical protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_11_curated
scnpilot_solids1_trim150_scaffold_360_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18313..18990)
DNA (678bp) protein (226aa)
Uncharacterized protein id=1317122 bin=GWE1_T_denit_62_9 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_360_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19381..20322
DNA (942bp) protein (314aa)
Tyrosine recombinase XerD id=1317121 bin=GWE1_T_denit_62_9 species=Kangiella koreensis genus=Kangiella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
tyrosine recombinase XerD; K04763 integrase/recombinase XerD
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_360_19
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20373..20570)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum UW551 RepID=A3RYW0_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EAP71284.1}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum UW551.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_360_20
Pseudomonas chloritidismutans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20613..21911)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QI70_PSECO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESR01503.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chloritidismutans AW-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_360_21
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21911..23125)
DNA (1215bp) protein (405aa)
Prophage LambdaMc01, helicase, SNF2 family n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q603W4_METCA
prophage LambdaMc01, SNF2 family helicase
Prophage LambdaMc01, helicase, SNF2 family {ECO:0000313|EMBL:AAU91285.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_solids1_trim150_scaffold_360_22
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23144..24688)
DNA (1545bp) protein (515aa)
RNA polymerase-associated protein RapA {ECO:0000313|EMBL:ESS14719.1}; EC=3.6.4.- {ECO:0000313|EMBL:ESS14719.1};; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
RNA polymerase-associated protein RapA n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V4Y273_9PROT
helicase domain-containing protein
scnpilot_solids1_trim150_scaffold_360_23
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24698..25198)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI0003781971
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_solids1_trim150_scaffold_360_24
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25195..28401)
DNA (3207bp) protein (1069aa)
hypothetical protein n=1 Tax=Pseudomonas mandelii RepID=UPI00035DBF3F rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_solids1_trim150_scaffold_360_25
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28425..30209)
DNA (1785bp) protein (595aa)
Sea9 n=1 Tax=Bordetella bronchiseptica 253 RepID=K4QLW3_BORBO rbh
Uncharacterized protein {ECO:0000313|EMBL:AIA45192.1}; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae subsp. pneumoniae KPNIH27.;"
sea9 rbh
scnpilot_solids1_trim150_scaffold_360_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30219..31295)
DNA (1077bp) protein (359aa)
SIR2-like domain protein n=1 Tax=Escherichia coli 2848050 RepID=M8XXK1_ECOLX rbh
Uncharacterized protein {ECO:0000313|EMBL:KJH06535.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_360_27
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31307..32296)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQE0_9BURK rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AET95555.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
scnpilot_solids1_trim150_scaffold_360_28
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32296..35115)
DNA (2820bp) protein (940aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MQD9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:AET95554.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_360_29
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35115..35369)
DNA (255bp) protein (85aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Pseudomonas stutzeri KOS6 RepID=K6D1V6_PSEST
Strain MEP34 contig_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92513.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
excisionase family DNA binding domain-containing protein
scnpilot_solids1_trim150_scaffold_360_30
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35492..36757
DNA (1266bp) protein (422aa)
Metallophosphoesterase n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JTX6_9GAMM rbh
metallophosphoesterase rbh
Metallophosphoesterase {ECO:0000313|EMBL:AEM46728.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans SS3.;"
Displaying items 1-30 of 32 in total

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