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scnpilot_solids1_trim150_scaffold_371

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_371_1
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..219
DNA (219bp) protein (73aa)
molybdopterin biosynthesis MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdopterin biosynthesis MoaE n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQG6_9SPHN
Molybdopterin biosynthesis MoaE {ECO:0000313|EMBL:ENY80685.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_371_2
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(740..988)
DNA (249bp) protein (83aa)
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_371_3
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1235..1846)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PLU1_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ86435.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_371_4
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2165..2872)
DNA (708bp) protein (236aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWT8_9SPHN rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:ENY82689.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Crp/Fnr family transcriptional regulator
scnpilot_solids1_trim150_scaffold_371_5
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2991..3137
DNA (147bp) protein (49aa)
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_6
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3140..3472
DNA (333bp) protein (111aa)
Cupin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGB1_9SPHN
Cupin {ECO:0000313|EMBL:ENY82688.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
cupin
scnpilot_solids1_trim150_scaffold_371_7
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3502..5754
DNA (2253bp) protein (751aa)
nitric oxide reductase large subunit-like protein; K04561 nitric oxide reductase subunit B [EC:1.7.2.5] rbh
Nitric oxide reductase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5A4_9SPHN rbh
Nitric oxide reductase large subunit {ECO:0000313|EMBL:ENY82687.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_371_8
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5751..6962
DNA (1212bp) protein (404aa)
NnrS family protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGY0_9SPHN rbh
NnrS family protein {ECO:0000313|EMBL:ENY82686.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
NnrS family protein; K07234 uncharacterized protein involved in response to NO
scnpilot_solids1_trim150_scaffold_371_9
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6959..7714
DNA (756bp) protein (252aa)
Crp/FNR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X7_9SPHN
Crp/FNR family transcriptional regulator; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_10
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7872..9533
DNA (1662bp) protein (554aa)
cbb3-type cytochrome c oxidase subunit I; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1]
Cbb3-type cytochrome c oxidase subunit I n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVD1_9SPHN rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_11
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9548..10324
DNA (777bp) protein (259aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSI4_SPHAL rbh
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_12
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10321..10485
DNA (165bp) protein (55aa)
Cb-type cytochrome c oxidase subunit IV n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFN1_9SPHN
cbb3-type cytochrome oxidase subunit; K00407 cytochrome c oxidase cbb3-type subunit IV
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_13
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10472..11401
DNA (930bp) protein (310aa)
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W3X8_9SPHN
cytochrome c oxidase, cbb3-type subunit III; K00406 cytochrome c oxidase cbb3-type subunit III rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_14
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11388..12845
DNA (1458bp) protein (486aa)
4Fe-4S ferredoxin n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WET8_9SPHN
4Fe-4S ferredoxin
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_15
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12842..13312
DNA (471bp) protein (157aa)
Integral membrane protein linked to a cation pump-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVD4_9SPHN
integral membrane protein linked to a cation pump-like protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_16
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13309..15429
DNA (2121bp) protein (707aa)
Heavy metal translocating P-type ATPase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UUV8_9SPHN rbh
heavy metal translocating P-type ATPase rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_17
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15426..15581
DNA (156bp) protein (52aa)
Nitrogen fixation protein FixS n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WFN4_9SPHN
cbb3-type cytochrome oxidase maturation protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_18
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15578..15805
DNA (228bp) protein (76aa)
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_371_19
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15867..17171
DNA (1305bp) protein (435aa)
coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Coproporphyrinogen-III oxidase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSJ1_SPHAL rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_371_20
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17266..17970)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UHJ1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AJA11206.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_371_21
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17979..20894)
DNA (2916bp) protein (972aa)
UPI0003D6274C related cluster n=1 Tax=unknown RepID=UPI0003D6274C
Conjugal transfer relaxase TraA {ECO:0000313|EMBL:AJA11207.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
conjugal transfer relaxase TraA
scnpilot_solids1_trim150_scaffold_371_22
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21067..21372
DNA (306bp) protein (102aa)
Conjugal transfer protein TraD n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HDR5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA08919.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_371_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21395..21640
DNA (246bp) protein (82aa)
conjugal transfer protein TraD n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C5CC
Uncharacterized protein {ECO:0000313|EMBL:AJA09275.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
conjugal transfer protein traD
scnpilot_solids1_trim150_scaffold_371_24
unknown

Not on your lists

21694..22833
DNA (1140bp) protein (380aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_371_25
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22924..23091
DNA (168bp) protein (56aa)
UPI0003CFD3CE related cluster n=1 Tax=unknown RepID=UPI0003CFD3CE
Uncharacterized protein {ECO:0000313|EMBL:KGB57716.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_371_26
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23095..23529)
DNA (435bp) protein (145aa)
MucR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5P9_9SPHN
Transcriptional regulator, MucR family {ECO:0000313|EMBL:KGB59030.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
MucR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_371_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23597..24169)
DNA (573bp) protein (191aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CP58_SPHYA
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKU74089.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_371_28
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24163..24672)
DNA (510bp) protein (170aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CP58_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AJA11214.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
scnpilot_solids1_trim150_scaffold_371_29
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24669..25160)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D987_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AJA08914.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_371_30
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25628..25819
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AF273
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
Displaying items 1-30 of 42 in total

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