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scnpilot_solids1_trim150_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_385_1
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..334
DNA (333bp) protein (111aa)
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=12495415 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium hominis ATCC 15826.;"
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
scnpilot_solids1_trim150_scaffold_385_2

Not on your lists

631..1887
DNA (1257bp) protein (419aa)
phage integrase family protein id=12498573 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria rbh
Integrase {ECO:0000313|EMBL:CBH97703.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phage integrase family protein
scnpilot_solids1_trim150_scaffold_385_3

Not on your lists

comp(1865..2089)
DNA (225bp) protein (75aa)
Phage transcriptional regulator, AlpA n=1 Tax=mine drainage metagenome RepID=E6PRZ6_9ZZZZ
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:CBH97702.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative phage transcriptional regulator; K07733 prophage regulatory protein
scnpilot_solids1_trim150_scaffold_385_4
unknown

Not on your lists

2730..3086
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_385_5
unknown

Not on your lists

3104..3367
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_385_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3899..4444
DNA (546bp) protein (182aa)
membrane protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003732F3D
hypothetical protein; K07230
Uncharacterized protein {ECO:0000313|EMBL:AAZ45869.1}; Flags: Precursor;; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
scnpilot_solids1_trim150_scaffold_385_7
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4465..6006
DNA (1542bp) protein (514aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361F38B
carbohydrate-selective porin
Tax=BJP_IG2103_Dechloromonas_63_51
scnpilot_solids1_trim150_scaffold_385_8
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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6025..6384
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036645A1
hypothetical protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
scnpilot_solids1_trim150_scaffold_385_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6397..7212
DNA (816bp) protein (272aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003767671
hypothetical protein; K07243 high-affinity iron transporter
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_385_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7209..8612
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035F919A
regulatory protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_385_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8634..10967)
DNA (2334bp) protein (778aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_385_12
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11017..11322)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEI7_GALCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL54963.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Gallionella capsiferriformans (strain ES-2) (Gallionella ferruginea; capsiferriformans (strain ES-2)).;"
scnpilot_solids1_trim150_scaffold_385_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11421..11759)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II id=1341260 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
nitrogen regulatory protein P-II
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_385_14
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11816..14902)
DNA (3087bp) protein (1029aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SEB5_GALCS
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA
Tax=GWA2_Gallionellales_54_124_curated
scnpilot_solids1_trim150_scaffold_385_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14913..16142)
DNA (1230bp) protein (410aa)
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND family efflux transporter MFP subunit; K15727 cobalt-zinc-cadmium resistance protein CzcB
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_385_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16175..17485)
DNA (1311bp) protein (437aa)
Outer membrane efflux protein id=1332411 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
outer membrane efflux protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_385_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17568..17927)
DNA (360bp) protein (120aa)
Putative uncharacterized protein id=1332412 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_385_18
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18097..18720)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003691171
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
scnpilot_solids1_trim150_scaffold_385_19
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18776..19018)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKB0_ACIF5
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ACH82470.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
scnpilot_solids1_trim150_scaffold_385_20
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19055..19729)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=mine drainage metagenome RepID=T1B2B0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:BAP87638.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_solids1_trim150_scaffold_385_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19743..20138)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKA9_ACIF5
Uncharacterized protein {ECO:0000313|EMBL:CDQ10252.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_385_22
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20172..22043)
DNA (1872bp) protein (624aa)
Putative cadmium-transporting ATPase {ECO:0000313|EMBL:CDQ10253.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CDQ10253.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKA8_ACIF5
scnpilot_solids1_trim150_scaffold_385_23
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22088..22489)
DNA (402bp) protein (134aa)
Transcriptional regulator, ArsR family n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 53993) RepID=B5EKA7_ACIF5
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDQ10254.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
ArsR family transcriptional regulator; K03892 ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_385_24
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22705..23553
DNA (849bp) protein (283aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
putative undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] rbh
Undecaprenyl-diphosphatase n=2 Tax=Ralstonia RepID=E2SSG4_9RALS rbh
scnpilot_solids1_trim150_scaffold_385_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24206..25591)
DNA (1386bp) protein (462aa)
multi-sensor signal transduction histidine kinase (EC:2.7.3.-)
histidine kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI00037E79A1 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_385_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25588..26280)
DNA (693bp) protein (231aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DE49F rbh
two component heavy metal response transcriptional regulator rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_385_27
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26372..28135
DNA (1764bp) protein (588aa)
copper-resistance protein CopA id=12498713 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
copper-resistance protein CopA
Copper-resistance protein CopA {ECO:0000313|EMBL:AAZ97277.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_385_28
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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28166..29173
DNA (1008bp) protein (336aa)
copper resistance protein B id=12498714 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
copper resistance protein B rbh
Copper resistance protein B {ECO:0000313|EMBL:BAN36057.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
scnpilot_solids1_trim150_scaffold_385_29
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29323..29685
DNA (363bp) protein (121aa)
hypothetical protein; K07810 Cu(I)/Ag(I) efflux system periplasmic protein CusF id=12498715 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K07810 Cu(I)/Ag(I) efflux system periplasmic protein CusF
Uncharacterized protein {ECO:0000313|EMBL:AAZ97279.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids1_trim150_scaffold_385_30
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29929..30570
DNA (642bp) protein (214aa)
cytochrome c family protein id=12497668 bin=THIO_MID species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
cytochrome c family protein
Cytochrome c family protein {ECO:0000313|EMBL:BAN36056.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
Displaying items 1-30 of 38 in total

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