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scnpilot_solids1_trim150_scaffold_468

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_468_1
unknown

Not on your lists

comp(321..878)
DNA (558bp) protein (186aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_468_2
unknown

Not on your lists

comp(875..1474)
DNA (600bp) protein (200aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_468_3
unknown

Not on your lists

comp(2024..2641)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00035CF795
scnpilot_solids1_trim150_scaffold_468_4
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2743..5469
DNA (2727bp) protein (909aa)
Putative CadC family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WH42_9SPHN
Putative CadC family transcriptional regulator {ECO:0000313|EMBL:AJA09090.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
putative CadC family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_468_5
unknown

Not on your lists

comp(5511..5630)
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_468_6
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5627..6031)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Burkholderia multivorans RepID=B9BUH5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:CDX21384.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_468_7
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6618..8033)
DNA (1416bp) protein (472aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036062FC rbh
Uncharacterized protein {ECO:0000313|EMBL:CCW19998.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
Relaxase/mobilization nuclease family protein
scnpilot_solids1_trim150_scaffold_468_8
Hyphomonas polymorpha, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..8289)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MTA8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ96924.1}; TaxID=1280954 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas polymorpha PS728.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_468_9
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8530..9372)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URW0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY81069.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_468_10
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9356..9724)
DNA (369bp) protein (123aa)
Nitrogen regulatory protein P-II n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WBD7_9SPHN
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ENY81068.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Nitrogen regulatory protein P-II
scnpilot_solids1_trim150_scaffold_468_11
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9741..12266)
DNA (2526bp) protein (842aa)
UPF0753 protein EBMC1_12055 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0R1_9SPHN rbh
UPF0753 protein EBMC1_12055 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein; K09822 hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_468_12
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12263..13648)
DNA (1386bp) protein (462aa)
NADH/ubiquinone/plastoquinone (complex I); K05577 NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3] rbh
NADH/ubiquinone/plastoquinone (Complex I) n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC74_9SPHN rbh
NADH/ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ENY81066.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_468_13
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13755..14621
DNA (867bp) protein (289aa)
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URG5_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ENY81065.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LysR family transcriptional regulator rbh
scnpilot_solids1_trim150_scaffold_468_14
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15079..16359)
DNA (1281bp) protein (427aa)
Major facilitator superfamily protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPI3_9GAMM
L-galactonate transporter {ECO:0000313|EMBL:ETN92208.1}; TaxID=1411685 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
major facilitator superfamily protein
scnpilot_solids1_trim150_scaffold_468_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16371..17426)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E8X6_9BURK rbh
Transposase {ECO:0000313|EMBL:GAO55541.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_468_16
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17439..17831)
DNA (393bp) protein (131aa)
Carboxymuconolactone decarboxylase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46S22_CUPPJ
Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:KGB56682.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
carboxymuconolactone decarboxylase
scnpilot_solids1_trim150_scaffold_468_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17912..18946
DNA (1035bp) protein (345aa)
AraC family transcriptional regulator n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WXR5_9NOCA
Transcriptional regulator of araC family {ECO:0000313|EMBL:GAO55543.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_468_18
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19306..20388
DNA (1083bp) protein (361aa)
LuxR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0M1_9SPHN rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:ENY81037.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
LuxR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_468_19
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20821..21465
DNA (645bp) protein (215aa)
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC43_9SPHN rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY81036.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_468_20
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21585..23867
DNA (2283bp) protein (761aa)
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URD3_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:ENY81035.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
TonB-dependent receptor rbh
scnpilot_solids1_trim150_scaffold_468_21
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23883..24770
DNA (888bp) protein (296aa)
Beta-lactamase-like protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URR8_9SPHN rbh
Beta-lactamase-like protein {ECO:0000313|EMBL:ENY81034.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
beta-lactamase-like protein rbh
scnpilot_solids1_trim150_scaffold_468_22
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24790..26022
DNA (1233bp) protein (411aa)
cytochrome P450; K00517 [EC:1.14.-.-] rbh
Cytochrome P450 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB96_9SPHN rbh
Cytochrome P450 {ECO:0000313|EMBL:ENY81033.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_468_23
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26027..27001)
DNA (975bp) protein (325aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0L6_9SPHN rbh
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ENY81032.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
alcohol dehydrogenase zinc-binding domain protein
scnpilot_solids1_trim150_scaffold_468_24
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27023..28984)
DNA (1962bp) protein (654aa)
cyclohexanone monooxygenase (EC:1.14.13.22); K14520 4-hydroxyacetophenone monooxygenase [EC:1.14.13.84] rbh
Cyclohexanone monooxygenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC38_9SPHN rbh
Cyclohexanone monooxygenase {ECO:0000313|EMBL:ENY81031.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_468_25
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29088..30767)
DNA (1680bp) protein (560aa)
AMP-dependent synthetase/ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] rbh
AMP-dependent synthetase/ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URC5_9SPHN rbh
AMP-dependent synthetase/ligase {ECO:0000313|EMBL:ENY81030.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_468_26
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30770..31948)
DNA (1179bp) protein (393aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URR4_9SPHN rbh
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ENY81029.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
iron-containing alcohol dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_468_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32091..33251
DNA (1161bp) protein (387aa)
L-carnitine dehydratase/bile acid-inducible protein F; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4] rbh
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WB91_9SPHN rbh
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ENY81028.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_468_28
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33326..34948)
DNA (1623bp) protein (541aa)
phosphodiesterase/alkaline phosphatase D; K01113 alkaline phosphatase D [EC:3.1.3.1] rbh
Phosphodiesterase/alkaline phosphatase D n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W0K8_9SPHN rbh
Phosphodiesterase/alkaline phosphatase D {ECO:0000313|EMBL:ENY81027.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
scnpilot_solids1_trim150_scaffold_468_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35639..35893)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WC33_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ENY81026.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_468_30
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35964..36938)
DNA (975bp) protein (325aa)
alcohol dehydrogenase; K00344 NADPH2:quinone reductase [EC:1.6.5.5] rbh
Alcohol dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9URC1_9SPHN rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:ENY81025.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Displaying items 1-30 of 34 in total

View Taxonomy