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scnpilot_solids1_trim150_scaffold_528

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_528_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92909.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
uncharacterized protein involved in outer membrane biogenesis
scnpilot_solids1_trim150_scaffold_528_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(575..1741)
DNA (1167bp) protein (389aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B9_9GAMM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal recognition particle-docking protein FtsY
scnpilot_solids1_trim150_scaffold_528_3
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1822..2391
DNA (570bp) protein (190aa)
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
16S rRNA m(2)G-966 methyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NGT5_9GAMM
16S rRNA m(2)G-966 methyltransferase
scnpilot_solids1_trim150_scaffold_528_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2531..3079
DNA (549bp) protein (183aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR1_9GAMM
scnpilot_solids1_trim150_scaffold_528_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3072..3572
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92251.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_528_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3668..4747
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJ31_9GAMM
Protein of unknown function (DUF1625)
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_528_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4844..6124)
DNA (1281bp) protein (427aa)
Putative signal transduction protein containing EAL and modified HD-GYP domains n=1 Tax=Rhodanobacter denitrificans RepID=M4NRA7_9GAMM
putative signal transduction protein containing EAL and modified HD-GYP domains
Putative signal transduction protein containing EAL and modified HD-GYP domains {ECO:0000313|EMBL:AGG90096.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6183..6629)
DNA (447bp) protein (149aa)
Flagellar biosynthesis/type III secretory pathway chaperone n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYF5_9GAMM
Flagellar biosynthesis/type III secretory pathway chaperone {ECO:0000313|EMBL:EIL92246.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar biosynthesis/type III secretory pathway chaperone
scnpilot_solids1_trim150_scaffold_528_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6626..6949)
DNA (324bp) protein (108aa)
Anti-sigma-28 factor FlgM n=1 Tax=Rhodanobacter denitrificans RepID=I4WQQ3_9GAMM
flagellar biosynthesis anti-sigma factor FlgM
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:AGG90094.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7067..7762)
DNA (696bp) protein (232aa)
Flagellar basal body P-ring biosynthesis protein FlgA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRX9_9GAMM
flagella basal body P-ring formation protein FlgA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_528_11
unknown

Not on your lists

7765..8445
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_528_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8402..8803
DNA (402bp) protein (134aa)
Flagellar basal body rod protein FlgB n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP9_9GAMM
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8803..9222
DNA (420bp) protein (140aa)
Flagellar basal body rod protein FlgC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE9_9GAMM
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar basal-body rod protein FlgC
scnpilot_solids1_trim150_scaffold_528_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9275..9910
DNA (636bp) protein (212aa)
Flagellar hook capping protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP7_9GAMM
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AGG90088.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9961..11181
DNA (1221bp) protein (407aa)
Flagellar hook protein FlgE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE7_9GAMM
Flagellar hook protein FlgE {ECO:0000313|EMBL:EIL92238.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar hook-basal body protein
scnpilot_solids1_trim150_scaffold_528_16
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11208..11948
DNA (741bp) protein (247aa)
Flagellar basal-body rod protein FlgF n=2 Tax=Rhodanobacter denitrificans RepID=M4NR97_9GAMM
flagellar basal-body rod protein FlgF
Flagellar basal-body rod protein FlgF {ECO:0000313|EMBL:AGG90086.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11995..12780
DNA (786bp) protein (262aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRY7_9GAMM
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:EIM02229.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar basal-body rod protein FlgG
scnpilot_solids1_trim150_scaffold_528_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12789..13478
DNA (690bp) protein (230aa)
Flagellar L-ring protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGR4_9GAMM
flagellar basal body L-ring protein
Flagellar L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Basal body L-ring protein {ECO:0000256|HAMAP-Rule:MF_00415}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..14737
DNA (1260bp) protein (420aa)
Flagellar P-ring protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NK84_9GAMM rbh
flagellar basal-body P-ring protein rbh
Flagellar P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Basal body P-ring protein {ECO:0000256|HAMAP-Rule:MF_00416}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14756..15883
DNA (1128bp) protein (376aa)
Flagellar rod assembly protein/muramidase FlgJ n=1 Tax=Rhodanobacter denitrificans RepID=I4WQP1_9GAMM
flagellar rod assembly protein/muramidase FlgJ
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_528_21
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16022..17896
DNA (1875bp) protein (625aa)
Flagellar hook-associated protein FlgK n=1 Tax=Rhodanobacter denitrificans RepID=M4NR90_9GAMM
flagellar hook-associated protein FlgK
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:AGG90081.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17907..19109
DNA (1203bp) protein (401aa)
Flagellar hook-associated protein 3 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYE0_9GAMM
flagellar hook-associated protein 3
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_528_23
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19236..20660
DNA (1425bp) protein (475aa)
Flagellin/flagellar hook associated protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NGQ8_9GAMM
flagellin/flagellar hook associated protein
Flagellin/flagellar hook associated protein {ECO:0000313|EMBL:AGG90079.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_528_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20726..22129
DNA (1404bp) protein (468aa)
Flagellar hook-associated protein 2 n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ4_9GAMM
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:EIM02236.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
flagellar capping protein
scnpilot_solids1_trim150_scaffold_528_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22156..22572
DNA (417bp) protein (139aa)
Flagellar protein FliS n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VYD7_9GAMM
Flagellar protein FliS {ECO:0000313|EMBL:EIL92228.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
flagellar biosynthetic protein FliS
scnpilot_solids1_trim150_scaffold_528_26
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22569..22847
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRZ6_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_528_27
unknown

Not on your lists

comp(23038..23394)
DNA (357bp) protein (119aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_528_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23394..23861)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ40_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62513.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_528_29

Not on your lists

comp(23858..24097)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0YW23_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD37233.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_528_30
Sinorhizobium phage phiM19, T4likevirus, Caudovirales, Viruses

Not on your lists

comp(24094..24231)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Sinorhizobium phage phiM12 RepID=S5M7M8_9CAUD
Uncharacterized protein {ECO:0000313|EMBL:AGR48101.1}; TaxID=1357423 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Tevenvirinae; T4likevirus.;" source="Sinorhizobium phage phiM12.;"
hypothetical protein
Displaying items 1-30 of 77 in total

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