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scnpilot_solids1_trim150_scaffold_549

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_549_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..613
DNA (612bp) protein (204aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F4_9GAMM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EIL93295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids1_trim150_scaffold_549_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(769..1401)
DNA (633bp) protein (211aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F7_9GAMM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIL93298.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids1_trim150_scaffold_549_3
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1398..1799)
DNA (402bp) protein (134aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VJK8_9GAMM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIL87399.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_549_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1911..2468)
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG48_9GAMM rbh
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL98439.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_549_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2465..3349)
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG49_9GAMM
scnpilot_solids1_trim150_scaffold_549_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..4395)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46) rbh
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=M4NE19_9GAMM rbh
scnpilot_solids1_trim150_scaffold_549_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4507..5754
DNA (1248bp) protein (416aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1)
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:AGG87744.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AGG87744.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB14_9GAMM
scnpilot_solids1_trim150_scaffold_549_8

Not on your lists

5830..7236
DNA (1407bp) protein (469aa)
Glycosyltransferase (Fragment) n=1 Tax=mine drainage metagenome RepID=T0ZD41_9ZZZZ rbh
Glycosyltransferase {ECO:0000313|EMBL:EQD42958.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_549_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7233..8027
DNA (795bp) protein (265aa)
Lipopolysaccharide ABC export system, permease protein n=1 Tax=Pseudomonas putida (strain KT2440) RepID=Q88LZ8_PSEPK rbh
lipopolysaccharide ABC export system, permease; K09690 lipopolysaccharide transport system permease protein rbh
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_549_10
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8024..9322
DNA (1299bp) protein (433aa)
Probable abc transporter atp-binding protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UFM5_XANAP
ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_549_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9378..11669
DNA (2292bp) protein (764aa)
tRNA (Mo5U34)-methyltransferase {ECO:0000313|EMBL:CCP14580.1}; EC=2.1.1.- {ECO:0000313|EMBL:CCP14580.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
tRNA (Mo5U34)-methyltransferase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5CTX2_STEMA
hypothetical protein
scnpilot_solids1_trim150_scaffold_549_12
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11674..12588
DNA (915bp) protein (305aa)
rmd; NDP-hexose oxidoreductase (EC:5.1.3.2)
NAD-dependent dehydratase n=1 Tax=Xanthomonas vasicola RepID=UPI0001CC005D
NAD-dependent dehydratase {ECO:0000313|EMBL:EYR69214.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
scnpilot_solids1_trim150_scaffold_549_13
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12585..13562
DNA (978bp) protein (326aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] rbh
GDP-mannose 4,6-dehydratase n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UFM2_XANAP rbh
scnpilot_solids1_trim150_scaffold_549_14
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13559..14590
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002F19EAD rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:EYR69212.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
group 1 glycosyl transferase
scnpilot_solids1_trim150_scaffold_549_15
Escherichia hermannii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14595..16952
DNA (2358bp) protein (786aa)
Putative uncharacterized protein n=1 Tax=Escherichia hermannii NBRC 105704 RepID=H5V0Q0_ESCHE
Putative uncharacterized protein {ECO:0000313|EMBL:GAB51558.1}; TaxID=1115512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia hermannii NBRC 105704.;"
glycosyltransferase
scnpilot_solids1_trim150_scaffold_549_16
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17072..19201
DNA (2130bp) protein (710aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:100 RepID=R7R403_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF45657.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_549_17
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19219..20562
DNA (1344bp) protein (448aa)
phosphomannomutase (EC:5.4.2.8)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345FB2A rbh
Phosphomannomutase {ECO:0000313|EMBL:KJV31658.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
scnpilot_solids1_trim150_scaffold_549_18
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20696..21361
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M009_METRJ
Uncharacterized protein {ECO:0000313|EMBL:GAN51992.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_549_19
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21613..22314)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z4P5_DESAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH86520.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
scnpilot_solids1_trim150_scaffold_549_20
unknown

Not on your lists

comp(22748..23329)
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_549_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23392..24804)
DNA (1413bp) protein (471aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX68_9GAMM
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EIL91809.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
scnpilot_solids1_trim150_scaffold_549_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24985..25938)
DNA (954bp) protein (318aa)
Family 2 glycosyl transferase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTY5_9GAMM rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:EIL90676.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_549_23
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26072..27016)
DNA (945bp) protein (315aa)
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR47_9SPHN
hypothetical protein; K07027
Hypothetical membrane protein {ECO:0000313|EMBL:BAK68413.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_solids1_trim150_scaffold_549_24
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27021..27728)
DNA (708bp) protein (236aa)
Methyltransferase type 11 n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E3M6_9GAMM
Methyltransferase type 11 {ECO:0000313|EMBL:EGZ48496.1}; TaxID=765914 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thiorhodospira.;" source="Thiorhodospira sibirica ATCC 700588.;"
SAM-dependent methyltransferase
scnpilot_solids1_trim150_scaffold_549_25
Leptospira wolffii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(27738..28790)
DNA (1053bp) protein (351aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EPG64436.1}; EC=2.4.-.- {ECO:0000313|EMBL:EPG64436.1};; TaxID=1193069 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira wolffii serovar Khorat str. Khorat-H2.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UJM6_9LEPT
type 11 methyltransferase
scnpilot_solids1_trim150_scaffold_549_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28975..29919)
DNA (945bp) protein (315aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTZ0_9GAMM rbh
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:EIL90681.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
electron transfer flavoprotein, alpha subunit
scnpilot_solids1_trim150_scaffold_549_27
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30063..30317)
DNA (255bp) protein (85aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTZ1_9GAMM
EtfB protein {ECO:0000313|EMBL:AHX15981.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
electron transfer flavoprotein, beta subunit
scnpilot_solids1_trim150_scaffold_549_28
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30314..30775)
DNA (462bp) protein (154aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1H7_9GAMM
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:EIL93318.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
electron transfer flavoprotein, beta subunit
scnpilot_solids1_trim150_scaffold_549_29
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31062..32048
DNA (987bp) protein (329aa)
Family 2 glycosyl transferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSW6_9GAMM rbh
putative glycosyltransferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:AGG87757.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_549_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32041..32973
DNA (933bp) protein (311aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NE33_9GAMM rbh
putative glycosyltransferase rbh
Putative glycosyltransferase {ECO:0000313|EMBL:AGG87758.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 35 in total

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