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scnpilot_solids1_trim150_scaffold_565

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_565_1
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2..607
DNA (606bp) protein (202aa)
ribonucleotide reductase; K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleotide reductase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXC4_TRURR
Ribonucleotide reductase {ECO:0000313|EMBL:ADI13248.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_565_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

690..1013
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Deinococcus wulumuqiensis RepID=UPI000346810D
Putative transmembrane protein (Modular protein) {ECO:0000313|EMBL:CDN91462.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
conserved membrane protein of unknown function
scnpilot_solids1_trim150_scaffold_565_3
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1075..1458)
DNA (384bp) protein (128aa)
Putative fluoride ion transporter CrcB 2 n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=CRCB2_DEIGD
crcB protein; K06199 CrcB protein
Putative fluoride ion transporter CrcB 2 {ECO:0000255|HAMAP-Rule:MF_00454}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
scnpilot_solids1_trim150_scaffold_565_4
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1677..2345)
DNA (669bp) protein (223aa)
alpha/beta hydrolase n=1 Tax=Paenisporosarcina sp. TG-14 RepID=UPI00031160D2
Uncharacterized protein {ECO:0000313|EMBL:ERI08541.1}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; Aneurinibacillus.;" source="Aneurinibacillus aneurinilyticus ATCC 12856.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids1_trim150_scaffold_565_5
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2461..4209)
DNA (1749bp) protein (583aa)
Transposase IS4 family protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IIX9_METNO rbh
transposase IS4 family protein rbh
Transposase IS4 family protein {ECO:0000313|EMBL:ACL61774.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids1_trim150_scaffold_565_6

Not on your lists

comp(4433..5119)
DNA (687bp) protein (229aa)
methyltransferase id=725297 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Methyltransferase {ECO:0000313|EMBL:AHB40197.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
scnpilot_solids1_trim150_scaffold_565_7
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5229..5825)
DNA (597bp) protein (199aa)
Resolvase domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K118_DESFR
Resolvase domain protein {ECO:0000313|EMBL:EFL49714.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
DNA integration/recombination/invertion protein
scnpilot_solids1_trim150_scaffold_565_8
unknown

Not on your lists

comp(6089..6673)
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_565_9
unknown

Not on your lists

7154..7723
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_565_10
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

7921..8211
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFI4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83446.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_565_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

8218..8742
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000347F26D
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
scnpilot_solids1_trim150_scaffold_565_12
unknown

Not on your lists

9039..9746
DNA (708bp) protein (236aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_565_13
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9822..10394
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EKH9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85191.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
resolvase, putative
scnpilot_solids1_trim150_scaffold_565_14
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

10391..10657
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00037D23C7
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:AFD28215.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
scnpilot_solids1_trim150_scaffold_565_15
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10709..11185)
DNA (477bp) protein (159aa)
Chromate transporter n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CT65_TRURR
chromate transporter; K07240 chromate transporter
Chromate transporter {ECO:0000313|EMBL:ADI15528.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_565_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11356..11823)
DNA (468bp) protein (156aa)
Cytidine/deoxycytidylate deaminase family protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JIR8_OLICO
cytidine/deoxycytidylate deaminase family protein
Nucleoside deaminase {ECO:0000313|EMBL:AEI05626.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_565_17
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11850..12680)
DNA (831bp) protein (277aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPV6_ALKMQ rbh
binding-protein-dependent transport system inner membrane protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR48224.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
scnpilot_solids1_trim150_scaffold_565_18
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12703..13623)
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A2T9_NATTJ rbh
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein rbh
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACB86307.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 /; JW/NM-WN-LF).;"
scnpilot_solids1_trim150_scaffold_565_19
Bacillus firmus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13713..15266)
DNA (1554bp) protein (518aa)
Extracellular solute-binding protein family 5 n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0U0_NATTJ
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:EWG09982.1}; TaxID=1307436 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus firmus DS1.;"
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_565_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15263..16033)
DNA (771bp) protein (257aa)
Conserved uncharacterized protein n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FE84_STIAD
hypothetical protein; K07045
Conserved uncharacterized protein {ECO:0000313|EMBL:ADO73854.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
scnpilot_solids1_trim150_scaffold_565_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16030..16821)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1UYP8_9DELT
hypothetical protein; K07045
Tax=RBG_13_Bathyarchaeota_38_9_curated
scnpilot_solids1_trim150_scaffold_565_22
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17207..17749
DNA (543bp) protein (181aa)
Transcriptional regulator, AsnC family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CT61_TRURR
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADI15524.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_565_23
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17746..19329
DNA (1584bp) protein (528aa)
gamma-glutamyltransferase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] rbh
Gamma-glutamyltransferase {ECO:0000313|EMBL:ADI15529.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ADI15529.1};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Gamma-glutamyltransferase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CT66_TRURR rbh
scnpilot_solids1_trim150_scaffold_565_24
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19616..20812)
DNA (1197bp) protein (399aa)
Putative transporter YycB n=1 Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZNC2_9ACTO
Putative transporter YycB {ECO:0000313|EMBL:EPH45016.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
inner membrane transport protein YeaN; K03449 MFS transporter, CP family, cyanate transporter
scnpilot_solids1_trim150_scaffold_565_25
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20986..21621)
DNA (636bp) protein (212aa)
type II site-specific deoxyribonuclease (EC:3.1.21.4); K01155 type II restriction enzyme [EC:3.1.21.4]
UPI0003CFAF92 related cluster n=1 Tax=unknown RepID=UPI0003CFAF92
Uncharacterized protein {ECO:0000313|EMBL:ETA00153.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
scnpilot_solids1_trim150_scaffold_565_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21863..22513
DNA (651bp) protein (217aa)
NYN domain protein n=1 Tax=Escherichia coli 2862600 RepID=N2PZP6_ECOLX
NYN domain protein {ECO:0000313|EMBL:KHH07051.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_565_27
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(22566..23234)
DNA (669bp) protein (223aa)
SMF family protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S0E2_FERPA
SMF family protein; K04096 DNA processing protein
SMF family protein {ECO:0000313|EMBL:ADC66205.1}; TaxID=589924 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
scnpilot_solids1_trim150_scaffold_565_28
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23375..27112)
DNA (3738bp) protein (1246aa)
Uncharacterized protein n=1 Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EQN3_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF41911.1}; TaxID=443218 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
scnpilot_solids1_trim150_scaffold_565_29
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

27487..28257
DNA (771bp) protein (257aa)
Integrase family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXP3_TRURR
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADI14645.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Displaying 29 items

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