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scnpilot_solids1_trim150_scaffold_600

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_600_1
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..852
DNA (852bp) protein (284aa)
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
scnpilot_solids1_trim150_scaffold_600_2
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

932..1207
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L2K6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA11491.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_3
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1217..2179
DNA (963bp) protein (321aa)
cation transporter n=1 Tax=Sphingomonas melonis RepID=UPI00037C63D3
Cation efflux protein {ECO:0000313|EMBL:AJA11490.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
cation efflux protein rbh
scnpilot_solids1_trim150_scaffold_600_4
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2387..2707)
DNA (321bp) protein (107aa)
UPI0003D045AA related cluster n=1 Tax=unknown RepID=UPI0003D045AA
Uncharacterized protein {ECO:0000313|EMBL:KGB59344.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2894..6103)
DNA (3210bp) protein (1070aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
dnaE2; error-prone DNA polymerase; K14162 error-prone DNA polymerase [EC:2.7.7.7] rbh
Error-prone DNA polymerase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDX2_9SPHN rbh
scnpilot_solids1_trim150_scaffold_600_6
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6100..7650)
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J1C3_9SPHN
Putative DNA polymerase protein {ECO:0000313|EMBL:AJA11487.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
imuB; protein ImuB; K14161 protein ImuB rbh
scnpilot_solids1_trim150_scaffold_600_7
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7826..8602)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZXZ7_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA11486.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
imuA; protein ImuA; K14160 protein ImuA rbh
scnpilot_solids1_trim150_scaffold_600_8
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8731..9363
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium JLT2015 RepID=M2TD74_9PROT
hypothetical protein; K06985 aspartyl protease family protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_600_9
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9514..9975
DNA (462bp) protein (154aa)
polyisoprenoid-binding protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489420
Uncharacterized protein {ECO:0000313|EMBL:AJA11485.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
cytochrome b/b6 domain-containing protein; K12262 cytochrome b561
scnpilot_solids1_trim150_scaffold_600_10
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9972..10424)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI00038004D7
Uncharacterized protein {ECO:0000313|EMBL:KGB59339.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_11
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10421..11038)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HXX0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB59338.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_12
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11094..11606
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3Q0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGB59337.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_13
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11603..12208
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0J1B8_9SPHN
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:KFG88623.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
2OG-Fe(II) oxygenase
scnpilot_solids1_trim150_scaffold_600_14
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12205..12474)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037A0465
Uncharacterized protein {ECO:0000313|EMBL:AJA07708.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_15
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12523..12807)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KGB53815.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
scnpilot_solids1_trim150_scaffold_600_16
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13086..13340)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HFJ2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB10858.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
scnpilot_solids1_trim150_scaffold_600_17
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13350..13667)
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE52178.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_18
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13756..14124)
DNA (369bp) protein (123aa)
Photosystem reaction center subunit H n=1 Tax=Sphingobium baderi LL03 RepID=T0GC82_9SPHN
Photosystem reaction center subunit H {ECO:0000313|EMBL:EQA97667.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
PRC-barrel domain-containing protein
scnpilot_solids1_trim150_scaffold_600_19
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14262..15095
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CQJ3_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE52139.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
scnpilot_solids1_trim150_scaffold_600_20
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15127..15456
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4J8P0_9BURK
Transcription initiation protein {ECO:0000313|EMBL:KDP72966.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_600_21
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15519..16076)
DNA (558bp) protein (186aa)
peptidase C56, PfpI; K05520 protease I [EC:3.2.-.-]
Peptidase C56, PfpI n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WEC8_9SPHN
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_solids1_trim150_scaffold_600_22
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16468..16743)
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361AF64
DNA-binding protein HU-beta {ECO:0000313|EMBL:KGB59336.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
histone-like DNA-binding protein; K03530 DNA-binding protein HU-beta
scnpilot_solids1_trim150_scaffold_600_23
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17035..17790
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJW6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA11480.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_600_24
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17997..18125)
DNA (129bp) protein (43aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJF3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ58566.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
scnpilot_solids1_trim150_scaffold_600_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18394..21066
DNA (2673bp) protein (891aa)
PHP-like n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120Y7_POLSJ
PHP-like
PHP-like {ECO:0000313|EMBL:ABE46905.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
scnpilot_solids1_trim150_scaffold_600_26
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21196..21882
DNA (687bp) protein (229aa)
MgtC/SapB transporter n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F159_SPHCR
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
scnpilot_solids1_trim150_scaffold_600_27
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22017..22802
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Sphingobium RepID=D4YZC9_SPHJU rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA11478.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_600_28
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22799..25735
DNA (2937bp) protein (979aa)
SEC-C motif family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UHX9_RHIRD rbh
Uncharacterized protein {ECO:0000313|EMBL:AJA11477.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SEC-C motif family protein rbh
scnpilot_solids1_trim150_scaffold_600_29
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25746..26462)
DNA (717bp) protein (239aa)
Similar to 3-oxoacyl carrier protein reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZC3_9BACT
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KGB59330.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_600_30
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26515..27057)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITD2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJA11475.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
hypothetical protein
Displaying 30 items

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