ggKbase home page

scnpilot_solids1_trim150_scaffold_715

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_715_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..1914)
DNA (1914bp) protein (638aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIF6_RHOM4
CopA family copper-resistance protein
Copper-resistance protein, CopA family {ECO:0000313|EMBL:ACY48264.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
scnpilot_solids1_trim150_scaffold_715_2
unknown

Not on your lists

comp(2149..2637)
DNA (489bp) protein (163aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3163..5580
DNA (2418bp) protein (806aa)
Copper-transporting ATPase {ECO:0000313|EMBL:BAH38368.1}; EC=3.6.3.4 {ECO:0000313|EMBL:BAH38368.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
copper-transporting ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Copper-transporting ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A808_GEMAT rbh
scnpilot_solids1_trim150_scaffold_715_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5958..6251
DNA (294bp) protein (98aa)
Heavy metal transport/detoxification protein n=2 Tax=Rhodothermus marinus RepID=D0MF76_RHOM4
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AHG91218.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
heavy metal transport/detoxification protein
scnpilot_solids1_trim150_scaffold_715_5
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6281..6661
DNA (381bp) protein (127aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFA2_ANADE
Uncharacterized protein {ECO:0000313|EMBL:GAO02191.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_715_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6689..9106
DNA (2418bp) protein (806aa)
cation-transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Cation-transporting P-type ATPase {ECO:0000313|EMBL:BAH39945.1}; EC=3.6.3.4 {ECO:0000313|EMBL:BAH39945.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Cation-transporting P-type ATPase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABR8_GEMAT rbh
scnpilot_solids1_trim150_scaffold_715_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9167..9559
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABR7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG89479.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_715_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9958..10455)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8E3_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38503.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_715_9
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

10730..11593
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A801_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38361.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
scnpilot_solids1_trim150_scaffold_715_10
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12354..12905
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5WYJ9_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EHR50664.1}; Flags: Precursor;; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_715_11
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists

comp(12976..13665)
DNA (690bp) protein (230aa)
Glycosyl transferase family 2 n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5STC7_PLAL2
family 2 glycosyl transferase
Tax=GWA1_OD1_51_14_curated
scnpilot_solids1_trim150_scaffold_715_12
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15293..16444)
DNA (1152bp) protein (384aa)
Cointegrate resolution protein S n=1 Tax=Desmospora sp. 8437 RepID=F5SBQ8_9BACL
Integrase {ECO:0000313|EMBL:KEO81260.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
integrase family protein
scnpilot_solids1_trim150_scaffold_715_13
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17441..17671)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Salmonella enterica I RepID=G5NEH8_SALET
Uncharacterized protein {ECO:0000313|EMBL:KKA52519.1}; TaxID=59202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. salamae.;"
scnpilot_solids1_trim150_scaffold_715_14
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17701..18834)
DNA (1134bp) protein (378aa)
Transposase of ISMex18, IS630 family n=2 Tax=Methylobacterium extorquens RepID=C7CND3_METED
transposase of ISMex18, IS630 family
Tax=BJP_IG2069_Syntrophobacterales_47_18
scnpilot_solids1_trim150_scaffold_715_15
unknown

Not on your lists

19156..19977
DNA (822bp) protein (274aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_16
unknown

Not on your lists

19989..20309
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_17
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21089..21628)
DNA (540bp) protein (180aa)
Feruloyl esterase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UQ99_METS4
feruloyl esterase
Tax=BJP_IG2069_Syntrophobacterales_47_18
scnpilot_solids1_trim150_scaffold_715_18
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21625..22098)
DNA (474bp) protein (158aa)
Transposase, IS4 family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT51_RUBXD
Transposase DDE domain {ECO:0000313|EMBL:AHY47305.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
IS4 family transposase
scnpilot_solids1_trim150_scaffold_715_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22148..22531)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0D866_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25018.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids1_trim150_scaffold_715_20

Not on your lists

comp(23089..23301)
DNA (213bp) protein (71aa)
Transposase, IS4 family protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1CVX2_9ZZZZ
Transposase, IS4 family protein {ECO:0000313|EMBL:EQD26368.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_solids1_trim150_scaffold_715_21
unknown

Not on your lists

comp(23403..23558)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_22
unknown

Not on your lists

25044..25454
DNA (411bp) protein (137aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_23
unknown

Not on your lists

25830..26465
DNA (636bp) protein (212aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_24
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26531..27874)
DNA (1344bp) protein (448aa)
Transposase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FT53_STIAD rbh
transposase rbh
Transposase {ECO:0000313|EMBL:ADO75863.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
scnpilot_solids1_trim150_scaffold_715_25
unknown

Not on your lists

28832..29200
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_715_26
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

29833..31293
DNA (1461bp) protein (487aa)
Uncharacterized protein {ECO:0000313|EMBL:KEF35774.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus sp. RL.;"
scnpilot_solids1_trim150_scaffold_715_27
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(31948..33018)
DNA (1071bp) protein (357aa)
Transposase n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WSB5_MYCKA
transposase
Tax=RBG_16_Acidobacteria_64_8_curated
Displaying 27 items

View Taxonomy