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scnpilot_solids1_trim150_scaffold_724

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_724_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2821
DNA (2820bp) protein (940aa)
TonB dependent receptor family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXE3_BREDI rbh
TonB dependent receptor family protein {ECO:0000313|EMBL:EGF94509.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB-dependent receptor
scnpilot_solids1_trim150_scaffold_724_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2830..5325
DNA (2496bp) protein (832aa)
Prolyl oligopeptidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXE2_BREDI rbh
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EGF94508.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_724_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5258..7012)
DNA (1755bp) protein (585aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXE1_BREDI rbh
Asparagine synthase family protein {ECO:0000313|EMBL:EGF94507.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
scnpilot_solids1_trim150_scaffold_724_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7016..7678)
DNA (663bp) protein (221aa)
Microcin J25-processing protein mcjB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXE0_BREDI
Microcin J25-processing protein mcjB {ECO:0000313|EMBL:EGF94506.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_724_5
unknown

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comp(7801..7923)
DNA (123bp) protein (41aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_724_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8017..8499)
DNA (483bp) protein (161aa)
Cro/CI family transcriptional regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD8_BREDI
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:EGF94504.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
XRE family transcriptional regulator
scnpilot_solids1_trim150_scaffold_724_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8730..9365
DNA (636bp) protein (212aa)
GntR family transcriptional regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD7_BREDI rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EGF94503.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_724_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9355..11238
DNA (1884bp) protein (628aa)
Conjugal transfer protein traG n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD6_BREDI rbh
Conjugal transfer protein traG {ECO:0000313|EMBL:EGF94502.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4
scnpilot_solids1_trim150_scaffold_724_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11231..11671
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94501.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
scnpilot_solids1_trim150_scaffold_724_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11661..12620
DNA (960bp) protein (320aa)
P-type conjugative transfer ATPase TrbB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD4_BREDI rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EGF94500.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 rbh
scnpilot_solids1_trim150_scaffold_724_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13024..13344
DNA (321bp) protein (107aa)
TrbC/VIRB2 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD3_BREDI
TrbC/VIRB2 family protein {ECO:0000313|EMBL:EGF94499.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
conjugal transfer protein TrbC
scnpilot_solids1_trim150_scaffold_724_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13344..13616
DNA (273bp) protein (91aa)
Conjugal transfer protein TrbD n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXD2_BREDI
Conjugal transfer protein TrbD {ECO:0000313|EMBL:EGF94498.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type IV secretory pathway VirB3 family protein
scnpilot_solids1_trim150_scaffold_724_13
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13618..16041
DNA (2424bp) protein (808aa)
Type IV secretion/conjugal transfer ATPase, VirB4 family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QET6_BREDI rbh
Conjugal transfer protein TrbE {ECO:0000313|EMBL:KJV38927.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
trbE; Conjugative transfer protein TrbE; K03199 type IV secretion system protein VirB4
scnpilot_solids1_trim150_scaffold_724_14
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15992..16732
DNA (741bp) protein (247aa)
Putative P-type conjugative transfer protein TrbJ n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFP1_BREDI
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:KDP95388.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
conjugal transfer protein TrbJ
scnpilot_solids1_trim150_scaffold_724_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16737..18110
DNA (1374bp) protein (458aa)
P-type conjugative transfer protein TrbL n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEZ3_BREDI rbh
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EKY26511.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
P-type conjugative transfer protein TrbL; K07344 type IV secretion system protein TrbL
scnpilot_solids1_trim150_scaffold_724_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18113..18796
DNA (684bp) protein (228aa)
Conjugal transfer family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXC9_BREDI rbh
Conjugal transfer family protein {ECO:0000313|EMBL:EGF94495.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
scnpilot_solids1_trim150_scaffold_724_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18775..19653
DNA (879bp) protein (293aa)
P-type conjugative transfer protein TrbG n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXC8_BREDI rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EGF94494.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
conjugal transfer protein TrbG; K03204 type IV secretion system protein VirB9
scnpilot_solids1_trim150_scaffold_724_18
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19650..20810
DNA (1161bp) protein (387aa)
Bacterial conjugation TrbI-like protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W818_9CAUL rbh
Uncharacterized protein {ECO:0000313|EMBL:KDP95188.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
trbI1; type IV secretion system subunit TrbI; K03195 type IV secretion system protein VirB10
scnpilot_solids1_trim150_scaffold_724_19
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20807..21316
DNA (510bp) protein (170aa)
Conjugal transfer pilin processing protease TraF family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q819_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KJV38938.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
conjugal transfer protein traF
scnpilot_solids1_trim150_scaffold_724_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21310..21912
DNA (603bp) protein (201aa)
Transglycosylase SLT domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QXC6_BREDI
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EGF94492.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lytic transglycosylase
scnpilot_solids1_trim150_scaffold_724_21
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21909..22187
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q7Z0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:KJV38922.1}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
scnpilot_solids1_trim150_scaffold_724_trna_1
unknown

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comp(23040..23126)
DNA (87bp)
transferRNA Ser
Displaying 22 items

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