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scnpilot_solids1_trim150_scaffold_835

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_835_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..552
DNA (552bp) protein (184aa)
Heavy metal RND efflux outer membrane protein,CzcC family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVH1_9PROT
Heavy metal RND efflux outer membrane protein,CzcC family {ECO:0000313|EMBL:CCU63325.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
outer membrane efflux protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
scnpilot_solids1_trim150_scaffold_835_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

549..2102
DNA (1554bp) protein (518aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIY1_9PROT
Hemolysin D {ECO:0000313|EMBL:KIO48668.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_solids1_trim150_scaffold_835_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2118..5330
DNA (3213bp) protein (1071aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Nitrosomonas sp. AL212 RepID=F0TD03_9PROT rbh
Cation transporter {ECO:0000313|EMBL:KIO48669.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CzcA family heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
scnpilot_solids1_trim150_scaffold_835_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5417..7738
DNA (2322bp) protein (774aa)
cadmium-translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Metal ABC transporter ATPase {ECO:0000313|EMBL:KIO48670.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Cadmium-translocating P-type ATPase id=1341268 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
scnpilot_solids1_trim150_scaffold_835_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7807..8514
DNA (708bp) protein (236aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUS8_9PROT
Cation transporter {ECO:0000313|EMBL:KIO48671.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_solids1_trim150_scaffold_835_6
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8496..9002)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036B940A
DDE superendonuclease family protein {ECO:0000313|EMBL:AJZ56939.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
transposase
scnpilot_solids1_trim150_scaffold_835_7
Pelodictyon phaeoclathratiforme, Pelodictyon, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(9020..9580)
DNA (561bp) protein (187aa)
resolvase n=1 Tax=Methylosarcina fibrata RepID=UPI00036197B2 rbh
resolvase rbh
Resolvase domain {ECO:0000313|EMBL:ACF43334.1}; TaxID=324925 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Pelodictyon.;" source="Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1).;"
scnpilot_solids1_trim150_scaffold_835_8
unknown

Not on your lists

comp(9625..10023)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_835_9
Paraglaciecola polaris, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10530..12701
DNA (2172bp) protein (724aa)
Transposase for transposon Tn4556 n=1 Tax=Glaciecola polaris LMG 21857 RepID=K6ZPW9_9ALTE
Transposase for transposon Tn4556 {ECO:0000313|EMBL:GAC32312.1}; TaxID=1129793 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola polaris LMG 21857.;"
tnpA; Transposase for ISThsp9 transposon of the Tn3 family
scnpilot_solids1_trim150_scaffold_835_10
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12698..12991)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QX12_RALPI
Mobile element protein {ECO:0000313|EMBL:CDS54757.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
transposase
scnpilot_solids1_trim150_scaffold_835_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13253..13798)
DNA (546bp) protein (182aa)
ISAfe3, transposase n=1 Tax=Thauera sp. 28 RepID=N6ZJL2_9RHOO
Transposase {ECO:0000313|EMBL:KJA11391.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ISAfe3, transposase
scnpilot_solids1_trim150_scaffold_835_12
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13798..14472)
DNA (675bp) protein (225aa)
ISAfe3, transposase n=1 Tax=Thauera sp. 28 RepID=N6ZJL2_9RHOO rbh
tnp32; transposase rbh
Transposase {ECO:0000313|EMBL:CAI08075.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
scnpilot_solids1_trim150_scaffold_835_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14754..15083
DNA (330bp) protein (110aa)
Cobalt/zinc/cadmium efflux RND transporter,membrane fusion protein, CzcB family n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUS8_9PROT
Cation transporter {ECO:0000313|EMBL:KIO48671.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
secretion protein HlyD; K15727 cobalt-zinc-cadmium resistance protein CzcB
scnpilot_solids1_trim150_scaffold_835_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15102..15473)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO48666.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
scnpilot_solids1_trim150_scaffold_835_15
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15800..16435)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000319906E
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_solids1_trim150_scaffold_835_16
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16516..16941
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FD488B
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_solids1_trim150_scaffold_835_17
unknown

Not on your lists

comp(16923..17102)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_835_18
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17048..18262)
DNA (1215bp) protein (405aa)
Chromate transport protein ChrA n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SIB9_HAHCH rbh
Chromate transporter {ECO:0000313|EMBL:KFL29460.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
chromate transporter; K07240 chromate transporter rbh
scnpilot_solids1_trim150_scaffold_835_19
unknown

Not on your lists

18363..18623
DNA (261bp) protein (87aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_835_20
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18586..18864)
DNA (279bp) protein (93aa)
Mercuric transport protein periplasmic component (Periplasmic mercury ion-binding protein) (Mercury scavenger protein) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CVR9_THIA3
merP; Mercuric transport protein periplasmic component precursor (Periplasmic mercury ion-binding protein) (Mercury scavenger protein)
Periplasmic mercury ion-binding protein {ECO:0000256|RuleBase:RU361212}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
scnpilot_solids1_trim150_scaffold_835_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18877..19224)
DNA (348bp) protein (116aa)
Mercuric transport protein (Mercury ion transport protein) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CVR8_THIA3
Mercury transporter MerT {ECO:0000313|EMBL:KGH30749.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
merT; Mercuric transport protein (Mercury ion transport protein)
scnpilot_solids1_trim150_scaffold_835_22
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19302..19700
DNA (399bp) protein (133aa)
Transcriptional regulator, MerR family n=39 Tax=Pseudomonas RepID=A4VQ08_PSEU5
MerR family transcriptional regulator
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
scnpilot_solids1_trim150_scaffold_835_23
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20525..20815
DNA (291bp) protein (97aa)
ISRm2011-2 transposase protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0ADU4_NITEC
ISRm2011-2 transposase protein
Transposase {ECO:0000313|EMBL:KGF66790.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
scnpilot_solids1_trim150_scaffold_835_24
Xenorhabdus bovienii, Xenorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21746..22900)
DNA (1155bp) protein (385aa)
conjugal transfer protein TrbI n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376FB9 rbh
Conjugation TrbI family protein {ECO:0000313|EMBL:CDH02258.1}; TaxID=1398200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Xenorhabdus.;" source="Xenorhabdus bovienii str. feltiae Moldova.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 rbh
scnpilot_solids1_trim150_scaffold_835_25
unknown

Not on your lists

comp(22897..23346)
DNA (450bp) protein (150aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_835_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23343..24251)
DNA (909bp) protein (303aa)
Putative mating pair formation protein n=2 Tax=Ralstonia solanacearum RepID=V5AS01_RALSL rbh
Conjugal transfer protein TrbG {ECO:0000313|EMBL:KIO48705.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
scnpilot_solids1_trim150_scaffold_835_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24248..24925)
DNA (678bp) protein (226aa)
conjugal transfer protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376FBC
Conjugal transfer protein {ECO:0000313|EMBL:KIO48643.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
conjugal transfer protein; K03200 type IV secretion system protein VirB5
scnpilot_solids1_trim150_scaffold_835_28
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24903..26318)
DNA (1416bp) protein (472aa)
P-type conjugative transfer protein TrbL n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SDQ4_CITFR rbh
Uncharacterized protein {ECO:0000313|EMBL:KIO48644.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
trbL protein; K07344 type IV secretion system protein TrbL rbh
scnpilot_solids1_trim150_scaffold_835_29
unknown

Not on your lists

comp(26318..26536)
DNA (219bp) protein (73aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_835_30
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26537..27283)
DNA (747bp) protein (249aa)
P-type conjugative transfer protein TrbJ n=3 Tax=Escherichia coli RepID=I2YAD0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KIO48646.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
trbJ; P-type conjugative transfer protein TrbJ
Displaying items 1-30 of 47 in total

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