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scnpilot_solids1_trim150_scaffold_871

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_871_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1115)
DNA (1113bp) protein (371aa)
Type IV-A pilus assembly ATPase PilB n=2 Tax=Rhodanobacter RepID=I4WIZ4_9GAMM
type IV-A pilus assembly ATPase PilB
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_871_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1604..1843
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VV17_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91058.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
looped-hinge helix DNA binding domain, AbrB family
scnpilot_solids1_trim150_scaffold_871_3
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1856..2308)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000361A47A
Twitching motility protein PilT {ECO:0000313|EMBL:KGO98757.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
scnpilot_solids1_trim150_scaffold_871_4
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2305..2646)
DNA (342bp) protein (114aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQW9_9BURK
CopG family transcriptional regulator {ECO:0000313|EMBL:KGO98758.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_871_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3041..3895
DNA (855bp) protein (285aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WIZ1_9GAMM rbh
glycosyl transferase rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL97152.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_871_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3888..5102
DNA (1215bp) protein (405aa)
Glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NBU0_9GAMM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGG88074.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5357..6307
DNA (951bp) protein (317aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NJX7_9GAMM
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AGG88076.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6291..7202
DNA (912bp) protein (304aa)
Putative glycosyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NDW1_9GAMM
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AGG88077.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_9

Not on your lists

comp(7209..8387)
DNA (1179bp) protein (393aa)
Glycosyl transferase family 9 {ECO:0000313|EMBL:EQD71933.1}; EC=2.4.-.- {ECO:0000313|EMBL:EQD71933.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Glycosyl transferase family 9 n=1 Tax=mine drainage metagenome RepID=T1BTQ4_9ZZZZ rbh
glycosyl transferase family protein
scnpilot_solids1_trim150_scaffold_871_10

Not on your lists

comp(8384..9154)
DNA (771bp) protein (257aa)
Methyltransferase type 11 domain protein {ECO:0000313|EMBL:EQD71932.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQD71932.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Methyltransferase type 11 domain protein n=2 Tax=mine drainage metagenome RepID=T1BPZ0_9ZZZZ
methyltransferase family protein
scnpilot_solids1_trim150_scaffold_871_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9190..10467)
DNA (1278bp) protein (426aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Rhodanobacter denitrificans RepID=M4NBP6_9GAMM
membrane protein involved in the export of O-antigen and teichoic acid
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:AGG88080.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10815..12875)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NJY1_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88081.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12872..15034)
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NDW5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88082.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15101..15541)
DNA (441bp) protein (147aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NEV3_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGG88083.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15883..16326)
DNA (444bp) protein (148aa)
Fimbrial protein P9-2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WIX7_9GAMM
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGG88084.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_16
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16727..17050)
DNA (324bp) protein (108aa)
Uncharacterized protein n=2 Tax=Bartonella elizabethae RepID=J0R9Y7_BAREL
HicB {ECO:0000313|EMBL:KER73246.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_871_17
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17050..17298)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LN45_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:ELR98933.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_871_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17490..19607
DNA (2118bp) protein (706aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCH7_9GAMM
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EIL97168.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
dipeptidyl aminopeptidase/acylaminoacyl peptidase
scnpilot_solids1_trim150_scaffold_871_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20258..21337)
DNA (1080bp) protein (360aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRW6_9GAMM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EIM02208.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids1_trim150_scaffold_871_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21444..22499)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WQR4_9GAMM
uncharacterized protein involved in outer membrane biogenesis
Uncharacterized protein involved in outer membrane biogenesis {ECO:0000313|EMBL:AGG90106.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_871_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22523..22720)
DNA (198bp) protein (66aa)
Signal recognition particle receptor FtsY n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W0B9_9GAMM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal recognition particle-docking protein FtsY
Displaying 21 items

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