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scnpilot_solids1_trim150_scaffold_896

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_896_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..411)
DNA (411bp) protein (137aa)
CopG n=2 Tax=Xanthomonadaceae RepID=F4ZBX7_XANCI
copG; hypothetical protein
Copper amine oxidase {ECO:0000313|EMBL:KDE89595.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
scnpilot_solids1_trim150_scaffold_896_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(381..1505)
DNA (1125bp) protein (375aa)
Cytochrome c family protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWM5_9GAMM
Cytochrome c family protein {ECO:0000313|EMBL:EIM01180.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ketosteroid isomerase-like enzyme
scnpilot_solids1_trim150_scaffold_896_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1517..2854)
DNA (1338bp) protein (446aa)
Copper resistance B n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSZ2_9GAMM
Copper resistance B {ECO:0000313|EMBL:EIL90333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
uncharacterized protein involved in copper resistance
scnpilot_solids1_trim150_scaffold_896_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2851..3432)
DNA (582bp) protein (194aa)
Copper-resistance protein, CopA family n=1 Tax=Rhodanobacter denitrificans RepID=M4NFL4_9GAMM
copper-resistance protein, CopA family
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_896_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3383..4582)
DNA (1200bp) protein (400aa)
Copper resistance transmembrane protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWM7_9GAMM
copper-resistance protein, CopA family
Copper-resistance protein, CopA family {ECO:0000313|EMBL:AGG88842.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_896_6
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4695..5099)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VRW5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89956.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids1_trim150_scaffold_896_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5158..5487)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NM93_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG88841.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_896_8
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5849..7264)
DNA (1416bp) protein (472aa)
two-component system heavy metal sensor histidine kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
Two-component system heavy metal sensor histidine kinase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UNJ1_PSEUP rbh
scnpilot_solids1_trim150_scaffold_896_9
Alcanivorax pacificus, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7257..7937)
DNA (681bp) protein (227aa)
Two-component system copper resistance phosphate regulon response regulator n=1 Tax=Alcanivorax pacificus W11-5 RepID=K2GS86_9GAMM rbh
Two-component system copper resistance phosphate regulon response regulator {ECO:0000313|EMBL:AJD49249.1}; TaxID=391936 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax pacificus W11-5.;"
two component heavy metal response transcriptional regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR rbh
scnpilot_solids1_trim150_scaffold_896_10
unknown

Not on your lists

comp(8378..8812)
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_896_11
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9144..10466
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000379C9FE
Outer membrane efflux protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_12
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10463..11932
DNA (1470bp) protein (490aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030A875A
CzcB family heavy metal RND efflux membrane fusion protein; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_13
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11934..15083
DNA (3150bp) protein (1050aa)
cation transporter n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036E8D90 rbh
czcA; heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_14
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15256..15768
DNA (513bp) protein (171aa)
MerR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EED2B9 rbh
MerR family transcriptional regulator
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_15
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15765..16079
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00037BCA58
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_16
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16081..16746
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002ECA994 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_17
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16743..19133
DNA (2391bp) protein (797aa)
ATPase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037A63E2 rbh
heavy metal translocating P-type ATPase
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_18
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19130..19543
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F34D00
Uncharacterized protein {ECO:0000313|EMBL:KFN47044.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_896_19
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19624..21009
DNA (1386bp) protein (462aa)
beta-Casp domain-containing protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F159E2 rbh
mRNA 3'-end processing factor {ECO:0000313|EMBL:KGM50716.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
beta-lactamase domain-containing protein; K07576 metallo-beta-lactamase family protein
scnpilot_solids1_trim150_scaffold_896_20
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21006..22523
DNA (1518bp) protein (506aa)
thymidine phosphorylase (EC:2.4.2.4)
Putative thymidine phosphorylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMB4_9GAMM
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_21
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22520..22984
DNA (465bp) protein (155aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00030A3926
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_22
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22956..25769
DNA (2814bp) protein (938aa)
D-xylulose 5-phosphate n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D85D71 rbh
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase rbh
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_23
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25795..27384
DNA (1590bp) protein (530aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F79AC5
hypothetical protein; K03688 ubiquinone biosynthesis protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_24
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27420..27902
DNA (483bp) protein (161aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_25
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27899..28756
DNA (858bp) protein (286aa)
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_26
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28756..29940
DNA (1185bp) protein (395aa)
Major facilitator superfamily permease n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUJ0_9RHIZ
major facilitator superfamily permease
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_27
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29943..31136
DNA (1194bp) protein (398aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane fatty acyl phospholipid synthase n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT73_PSEUP
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_28
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31149..31796
DNA (648bp) protein (216aa)
hypothetical protein id=12551597 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
scnpilot_solids1_trim150_scaffold_896_29

Not on your lists

32097..33152
DNA (1056bp) protein (352aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F29A5E rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN52346.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_896_30
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33592..34635)
DNA (1044bp) protein (348aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVV2_POLNA rbh
Uncharacterized protein {ECO:0000313|EMBL:KFN47066.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
phospholipase D/transphosphatidylase rbh
Displaying items 1-30 of 32 in total

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