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scnpilot_solids1_trim150_scaffold_906

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_906_1
Caldithrix abyssi, Caldithrix, Bacteria

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117..1349
DNA (1233bp) protein (411aa)
Transposase mutator type n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQB2_9BACT
Transposase mutator type {ECO:0000313|EMBL:EHO39999.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
transposase mutator type
scnpilot_solids1_trim150_scaffold_906_2
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

1563..2663
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Streptomyces rapamycinicus RepID=UPI000382F5EF
capsule synthesis protein, capA; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)
Tax=RBG_16_Armatimonadetes_67_12_curated
scnpilot_solids1_trim150_scaffold_906_3
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2980..3456
DNA (477bp) protein (159aa)
Transposase IS3/IS911 family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6N0_NAKMY
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACV78885.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
scnpilot_solids1_trim150_scaffold_906_4
unknown

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comp(3691..4167)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_906_5
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4155..5513)
DNA (1359bp) protein (453aa)
glutamate-1-semialdehyde-2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CW52_TRURR
scnpilot_solids1_trim150_scaffold_906_6
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5510..6856)
DNA (1347bp) protein (449aa)
protoporphyrinogen oxidase; K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4]
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ADI13719.1}; EC=1.3.3.4 {ECO:0000313|EMBL:ADI13719.1};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Protoporphyrinogen oxidase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSV2_TRURR
scnpilot_solids1_trim150_scaffold_906_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6920..8020)
DNA (1101bp) protein (367aa)
ferrochelatase; K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Ferrochelatase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXZ8_TRURR
scnpilot_solids1_trim150_scaffold_906_8
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8100..8999)
DNA (900bp) protein (300aa)
coproporphyrinogen oxidase; K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] rbh
Coproporphyrinogen oxidase {ECO:0000256|SAAS:SAAS00122066}; EC=1.3.3.3 {ECO:0000256|SAAS:SAAS00122066};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Coproporphyrinogen oxidase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY01_TRURR rbh
scnpilot_solids1_trim150_scaffold_906_9
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8996..10027)
DNA (1032bp) protein (344aa)
uroporphyrinogen decarboxylase; K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Uroporphyrinogen decarboxylase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY02_TRURR
scnpilot_solids1_trim150_scaffold_906_10
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10032..10748)
DNA (717bp) protein (239aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY03_TRURR rbh
winged helix family two component transcriptional regulator rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADI13363.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_906_11
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10748..11887)
DNA (1140bp) protein (380aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY04_TRURR
integral membrane sensor signal transduction histidine kinase
scnpilot_solids1_trim150_scaffold_906_12
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(11884..12963)
DNA (1080bp) protein (360aa)
porphobilinogen synthase; K01698 porphobilinogen synthase [EC:4.2.1.24] rbh
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY05_TRURR rbh
scnpilot_solids1_trim150_scaffold_906_13
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12960..13754)
DNA (795bp) protein (265aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen III synthase HEM4 n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDK3_MEISD
Uroporphyrinogen III synthase HEM4 {ECO:0000313|EMBL:ADH64823.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
scnpilot_solids1_trim150_scaffold_906_14
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13751..14653)
DNA (903bp) protein (301aa)
porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] rbh
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
Porphobilinogen deaminase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDK2_MEISD rbh
scnpilot_solids1_trim150_scaffold_906_15
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(14650..15684)
DNA (1035bp) protein (345aa)
glutamyl-tRNA reductase; K02492 glutamyl-tRNA reductase [EC:1.2.1.70] rbh
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087};; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Glutamyl-tRNA reductase n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY08_TRURR rbh
scnpilot_solids1_trim150_scaffold_906_16
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16497..16748
DNA (252bp) protein (84aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BHL2_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05087.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_906_17
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16759..17688
DNA (930bp) protein (310aa)
UPI0003D06C2D related cluster n=1 Tax=unknown RepID=UPI0003D06C2D
tonB; TonB domain-containing protein
Tax=GWA2_Gallionellales_54_124_curated
scnpilot_solids1_trim150_scaffold_906_18
unknown

Not on your lists

17892..18242
DNA (351bp) protein (117aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_906_19
unknown

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18840..20687
DNA (1848bp) protein (616aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_906_20

Not on your lists

20671..22329
DNA (1659bp) protein (553aa)
UPI0003D68E96 related cluster n=1 Tax=unknown RepID=UPI0003D68E96
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_L02535 {ECO:0000313|EMBL:GAF76942.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_906_21
unknown

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comp(22417..22545)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 21 items

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