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scnpilot_solids1_trim150_scaffold_974

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_974_1
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..395
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPC3_SIDLE
hypothetical protein; K11473 glycolate oxidase iron-sulfur subunit
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
scnpilot_solids1_trim150_scaffold_974_2
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(493..1740)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E6E54D rbh
Uncharacterized protein {ECO:0000313|EMBL:EZP77040.1}; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_974_3
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1730..3361)
DNA (1632bp) protein (544aa)
beta-lactamase n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002D620AF rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ41548.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
beta-lactamase rbh
scnpilot_solids1_trim150_scaffold_974_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3569..4651)
DNA (1083bp) protein (361aa)
Glycoside hydrolase family 18 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y743_9SPHI
Glycoside hydrolase family 18 {ECO:0000313|EMBL:EHQ28662.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
glycoside hydrolase family protein
scnpilot_solids1_trim150_scaffold_974_5
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5288..8368
DNA (3081bp) protein (1027aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000368D76E rbh
outer membrane receptor protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids1_trim150_scaffold_974_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8476..10080
DNA (1605bp) protein (535aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036EC024 rbh
Sulfotransferase {ECO:0000313|EMBL:AHX13479.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
tetratricopeptide repeat protein,sulfotransferase family protein
scnpilot_solids1_trim150_scaffold_974_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10091..10879
DNA (789bp) protein (263aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Dyella ginsengisoli RepID=UPI0003456332
negative regulator of beta-lactamase expression
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:AGG90480.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_974_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10977..12203
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003829739 rbh
Putative hydrolase {ECO:0000313|EMBL:EIL98347.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase
scnpilot_solids1_trim150_scaffold_974_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12285..13964)
DNA (1680bp) protein (560aa)
Amino acid permease n=1 Tax=Rhodanobacter sp. 115 RepID=I4WRK5_9GAMM rbh
Amino acid permease {ECO:0000313|EMBL:KGI77634.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
amino acid permease rbh
scnpilot_solids1_trim150_scaffold_974_10
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14022..15347)
DNA (1326bp) protein (442aa)
D-amino acid dehydrogenase small subunit n=1 Tax=Rhodanobacter denitrificans RepID=I4WV70_9GAMM
glycine/D-amino acid oxidase, deaminating
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_974_11
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15365..17188)
DNA (1824bp) protein (608aa)
Amidohydrolase 3 n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7I2_9GAMM
Amidohydrolase 3 {ECO:0000313|EMBL:EIL95423.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
amidohydrolase 3; K07047
scnpilot_solids1_trim150_scaffold_974_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17236..19710)
DNA (2475bp) protein (825aa)
Outer membrane receptor for ferrienterochelin and colicins n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5A0_9GAMM
outer membrane receptor for ferrienterochelin and colicins; K02014 iron complex outermembrane recepter protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_974_13
unknown

Not on your lists

comp(19707..19934)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_974_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20060..20962)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036B340D rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EIL94642.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_974_15
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21116..22297
DNA (1182bp) protein (394aa)
NODE_25, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98144.1}; EC=3.4.11.19 {ECO:0000313|EMBL:KIQ98144.1};; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] rbh
Peptidase S58 DmpA n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPS0_MURRD rbh
scnpilot_solids1_trim150_scaffold_974_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22504..23547
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036E380D rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL94639.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_974_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23532..24518
DNA (987bp) protein (329aa)
Mandelate racemase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W597_9GAMM
Mandelate racemase {ECO:0000313|EMBL:EIL94638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mandelate racemase rbh
scnpilot_solids1_trim150_scaffold_974_18
unknown

Not on your lists

24641..24742
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 18 items

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