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scnpilot_solids1_trim150_scaffold_999

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_999_1
unknown

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comp(3..137)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_999_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(141..737)
DNA (597bp) protein (199aa)
Sortase-like acyltransferase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZMD8_TERRK
sortase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
scnpilot_solids1_trim150_scaffold_999_3
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

824..1456
DNA (633bp) protein (211aa)
NmrA family protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAK7_NITWC rbh
NmrA family protein rbh
NmrA family protein {ECO:0000313|EMBL:ADJ29434.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
scnpilot_solids1_trim150_scaffold_999_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1707..2090
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Rhodospirillum rubrum RepID=Q2RTD7_RHORT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ47584.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
scnpilot_solids1_trim150_scaffold_999_5
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2115..2600)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU47_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_999_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2792..3898
DNA (1107bp) protein (369aa)
Signal transduction histidine kinase LytS n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU49_9GAMM
Signal transduction histidine kinase LytS {ECO:0000313|EMBL:EIL90740.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
signal transduction histidine kinase LytS
scnpilot_solids1_trim150_scaffold_999_7
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3901..4650
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D7B975
LytTR family two component transcriptional regulator {ECO:0000313|EMBL:GAN44963.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
lytT1; Sensory transduction protein lytT
scnpilot_solids1_trim150_scaffold_999_8
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4776..5804
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D11F6
Uncharacterized protein {ECO:0000313|EMBL:GAN44959.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
periplasmic component of the Tol biopolymer transport system
scnpilot_solids1_trim150_scaffold_999_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5997..6977
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VU59_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90750.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
periplasmic component of the Tol biopolymer transport system
scnpilot_solids1_trim150_scaffold_999_10
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7055..7972
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00030D11F6
Uncharacterized protein {ECO:0000313|EMBL:AIF46718.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
periplasmic component of the Tol biopolymer transport system
scnpilot_solids1_trim150_scaffold_999_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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8081..8662
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003769D12
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids1_trim150_scaffold_999_12
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8768..10060
DNA (1293bp) protein (431aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase n=1 Tax=Dyella ginsengisoli RepID=UPI00034C809B
scnpilot_solids1_trim150_scaffold_999_trna_1
unknown

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10120..10206
DNA (87bp)
transferRNA Ser
scnpilot_solids1_trim150_scaffold_999_13
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10473..12767
DNA (2295bp) protein (765aa)
Oxidoreductase alpha (Molybdopterin) subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHG3_METNO rbh
oxidoreductase alpha (molybdopterin) subunit rbh
Oxidoreductase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:ACL61626.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
scnpilot_solids1_trim150_scaffold_999_14
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12992..13573)
DNA (582bp) protein (194aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D90638
acyl carrier protein phosphodiesterase
scnpilot_solids1_trim150_scaffold_999_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13685..14608
DNA (924bp) protein (308aa)
Transcriptional regulator n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW78_9GAMM
Transcriptional regulator {ECO:0000313|EMBL:EIL91469.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_999_16

Not on your lists

14679..15824
DNA (1146bp) protein (382aa)
aminotransferase n=1 Tax=Rudaea cellulosilytica RepID=UPI000378ADB5 rbh
Aminotransferase class I and II {ECO:0000313|EMBL:EQD70959.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids1_trim150_scaffold_999_17
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15881..16675
DNA (795bp) protein (265aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WSW7_PSEUU
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K08590 carbon-nitrogen hydrolase family protein
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ADV27123.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
scnpilot_solids1_trim150_scaffold_999_18
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16835..17779)
DNA (945bp) protein (315aa)
DNA/RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
RNA helicase n=1 Tax=Dyella japonica RepID=UPI0002F0752C
RNA helicase {ECO:0000313|EMBL:AHX12437.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Displaying 19 items

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