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scnpilot_solids1_trim150_scaffold_3003

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3003_1
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1..378
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000375F2E6
Uncharacterized protein {ECO:0000313|EMBL:AKG36305.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
mandelate racemase/muconate lactonizing protein
scnpilot_solids1_trim150_scaffold_3003_2
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(428..1603)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Burkholderia thailandensis MSMB43 RepID=I6AMI2_BURTH rbh
VWA domain containing CoxE-like family protein {ECO:0000313|EMBL:KGS01319.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
hypothetical protein; K09989 hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_3003_3
Alcanivorax sp. DG881, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1597..2205)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXM5_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EDX90822.1}; TaxID=236097 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. DG881.;"
acetyltransferase protein
scnpilot_solids1_trim150_scaffold_3003_4
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2209..3051)
DNA (843bp) protein (281aa)
ATPase AAA n=1 Tax=Thauera sp. 63 RepID=N6XAW3_9RHOO rbh
ATPase AAA {ECO:0000313|EMBL:ENO76480.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
ATPase AAA rbh
scnpilot_solids1_trim150_scaffold_3003_5
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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3226..3594
DNA (369bp) protein (123aa)
Cytochrome C n=39 Tax=Bordetella RepID=V8TZ42_BORPT
cytochrome
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
scnpilot_solids1_trim150_scaffold_3003_6
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3606..4025
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E896F1
cytC2; cytochrome c, class IC
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
scnpilot_solids1_trim150_scaffold_3003_7
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4022..4537
DNA (516bp) protein (172aa)
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; TaxID=57975 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandens
ribonuclease n=1 Tax=Burkholderia thailandensis RepID=UPI00016A53F9
rraA; ribonuclease activity regulator protein RraA; K02553 regulator of ribonuclease activity A
scnpilot_solids1_trim150_scaffold_3003_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4532..5818)
DNA (1287bp) protein (429aa)
molybdopterin molybdochelatase; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] rbh
molybdenum cofactor biosynthesis protein MoaA n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F6B326 rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
scnpilot_solids1_trim150_scaffold_3003_9
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5841..6461)
DNA (621bp) protein (207aa)
molybdopterin-guanine dinucleotide biosynthesis protein A n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037297DA
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
scnpilot_solids1_trim150_scaffold_3003_10
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6511..7128)
DNA (618bp) protein (206aa)
Formate dehydrogenase accessory protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GP19_9BURK
Formate dehydrogenase accessory protein {ECO:0000313|EMBL:EDM84005.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
fdhD; putative formate dehydrogenase accessory protein
scnpilot_solids1_trim150_scaffold_3003_11
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7367..8491)
DNA (1125bp) protein (375aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Caldimonas manganoxidans RepID=UPI00036A69D0 rbh
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein rbh
scnpilot_solids1_trim150_scaffold_3003_12
unknown

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8527..8682
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 12 items

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