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scnpilot_solids1_trim150_scaffold_3156

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3156_1
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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277..678
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK2_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52990.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3156_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

727..2010
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK3_NITHX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE64994.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
scnpilot_solids1_trim150_scaffold_3156_3
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3498..4052
DNA (555bp) protein (185aa)
Sigma-24 n=3 Tax=Oligotropha carboxidovorans RepID=B6JKC4_OLICO rbh
putative RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
Putative RNA polymerase sigma factor protein {ECO:0000313|EMBL:AEI08239.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_3156_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4049..4690
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JKC5_OLICO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI08238.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_3156_5
unknown

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4901..5152
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3156_6
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5256..5537
DNA (282bp) protein (94aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BQZ2_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI08236.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_3156_7
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6054..6962
DNA (909bp) protein (303aa)
Membrane fusion protein CusB n=2 Tax=Oligotropha carboxidovorans RepID=B6JKC7_OLICO rbh
cusB; membrane fusion protein CusB rbh
Membrane fusion protein CusB {ECO:0000313|EMBL:AEI08235.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
scnpilot_solids1_trim150_scaffold_3156_8
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6959..7600
DNA (642bp) protein (214aa)
Secretion protein HlyD n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFK8_NITHX
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52995.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
secretion protein HlyD; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
scnpilot_solids1_trim150_scaffold_3156_9
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7597..10797
DNA (3201bp) protein (1067aa)
Heavy metal efflux pump CusA n=2 Tax=Oligotropha carboxidovorans RepID=F8BJG6_OLICM rbh
Cation efflux system protein CusA {ECO:0000313|EMBL:CEG10177.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
cusA2; heavy metal efflux pump CusA rbh
scnpilot_solids1_trim150_scaffold_3156_10
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10929..11330
DNA (402bp) protein (134aa)
Cation efflux system protein CusA n=3 Tax=Oligotropha carboxidovorans RepID=B6JKC8_OLICO
Bradyrhizobium elkanii strain UASWS1015 Contig152, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52997.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein; K07810 Cu(I)/Ag(I) efflux system periplasmic protein CusF
scnpilot_solids1_trim150_scaffold_3156_11
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11431..11538
DNA (108bp) protein (36aa)
50S ribosomal protein L29 n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E524F2
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
50S ribosomal protein L29
Displaying 11 items

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