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scnpilot_solids1_trim150_scaffold_3478

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3478_1
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..110)
DNA (108bp) protein (36aa)
plasmid stablization protein ParB n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002E289C8
Chromosome-partitioning protein Spo0J {ECO:0000313|EMBL:AKC05742.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
putative ParB-like nuclease domain-containing protein; K03497 chromosome partitioning protein, ParB family
scnpilot_solids1_trim150_scaffold_3478_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175..999)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UA44_RALPJ rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC05741.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_3478_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1628..2062
DNA (435bp) protein (145aa)
Putative transposase, IS4/IS5 family n=1 Tax=Variovorax paradoxus B4 RepID=T1X6P5_VARPD
putative transposase, IS4/IS5 family
Putative transposase, IS4/IS5 family {ECO:0000313|EMBL:AGU47840.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids1_trim150_scaffold_3478_4
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2775..2996)
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KFC53275.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
scnpilot_solids1_trim150_scaffold_3478_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3020..4102
DNA (1083bp) protein (361aa)
Sulfate transporter n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L3Z1_PSEAI
Inorganic anion transporter, SulP family {ECO:0000313|EMBL:KDD60149.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
sulP; sulfate transporter
scnpilot_solids1_trim150_scaffold_3478_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4115..4978
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA010 RepID=U9MBZ1_PSEAI rbh
Universal stress family protein {ECO:0000313|EMBL:KDD60131.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
uspA11; universal stress protein UspA rbh
scnpilot_solids1_trim150_scaffold_3478_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5042..5320)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI00030CBA3E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC05740.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
scnpilot_solids1_trim150_scaffold_3478_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5386..5736)
DNA (351bp) protein (117aa)
transposase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002F6D369
Uncharacterized protein {ECO:0000313|EMBL:AKC05739.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3478_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6018..6347
DNA (330bp) protein (110aa)
Regulatory protein ArsR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GGB9_ALIDK
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEB83989.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_3478_10
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6319..6801
DNA (483bp) protein (161aa)
hypothetical protein; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SIB3_METPP
Glyoxalase-like domain protein {ECO:0000313|EMBL:KCB41862.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
scnpilot_solids1_trim150_scaffold_3478_11
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6814..7896
DNA (1083bp) protein (361aa)
Putative sodium bile acid symporter family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I9D2_BORPD
sodium bile acid symporter family protein; K03325 arsenite transporter, ACR3 family
Putative sodium bile acid symporter family protein {ECO:0000313|EMBL:CAP41355.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
scnpilot_solids1_trim150_scaffold_3478_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7910..8332
DNA (423bp) protein (141aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029, ECO:0000313|EMBL:KIL06583.1}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
arsC3; arsenate reductase (EC:1.20.4.1); K00537 arsenate reductase [EC:1.20.4.1]
Arsenate reductase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5L2E7_PSEAI
scnpilot_solids1_trim150_scaffold_3478_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..8901)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002EAE580 rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC05738.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
DNA repair protein Radc; K03630 DNA repair protein RadC
scnpilot_solids1_trim150_scaffold_3478_14
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9229..10383)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSP3_THISH rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL72947.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
scnpilot_solids1_trim150_scaffold_3478_15
Pseudomonas frederiksbergensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10380..11585)
DNA (1206bp) protein (402aa)
Integrase family protein n=4 Tax=Proteobacteria RepID=B2UA34_RALPJ rbh
Integrase {ECO:0000313|EMBL:KHK65604.1}; TaxID=104087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas frederiksbergensis.;"
integrase family protein rbh
scnpilot_solids1_trim150_scaffold_3478_16
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12239..12544
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Methylotenera mobilis RepID=UPI0003751323
hypothetical protein
PsiF repeat protein {ECO:0000313|EMBL:ACM31815.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_3478_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12610..13761
DNA (1152bp) protein (384aa)
hypothetical protein id=12495386 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3478_18
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13819..14358
DNA (540bp) protein (180aa)
elongation factor P; K02356 elongation factor P id=12495387 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
elongation factor P; K02356 elongation factor P
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3478_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14507..15574
DNA (1068bp) protein (356aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III, alpha subunit id=1324808 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
Displaying 19 items

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