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scnpilot_solids1_trim150_scaffold_3685

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3685_1
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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208..1233
DNA (1026bp) protein (342aa)
Integrase n=1 Tax=Thauera sp. 63 RepID=N6Y7Z7_9RHOO
integrase
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
scnpilot_solids1_trim150_scaffold_3685_2
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1399..1680
DNA (282bp) protein (94aa)
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4KCG7_THASP
RelB/DinJ family addiction module antitoxin; K07473 DNA-damage-inducible protein J
Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
scnpilot_solids1_trim150_scaffold_3685_3
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1652..1972
DNA (321bp) protein (107aa)
Translation repressor RelE n=1 Tax=Thauera terpenica 58Eu RepID=S9ZPJ3_9RHOO
Translation repressor RelE {ECO:0000313|EMBL:EPZ15452.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
RelE/StbE family addiction module toxin
scnpilot_solids1_trim150_scaffold_3685_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2128..2988)
DNA (861bp) protein (287aa)
Putative uncharacterized protein id=1361659 bin=GWE1_T_denit_62_9 species=Xanthomonas fuscans genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
WYL domain protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_3685_5
unknown

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comp(3193..3450)
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_6
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3469..3861
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Shewanella baltica RepID=A9L1Y9_SHEB9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX49407.1}; Flags: Precursor;; TaxID=399599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (strain OS195).;"
scnpilot_solids1_trim150_scaffold_3685_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3923..4210)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A030_PELCD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
scnpilot_solids1_trim150_scaffold_3685_8

Not on your lists

comp(4230..4817)
DNA (588bp) protein (196aa)
Marine sediment metagenome DNA, contig: S01H4_S02982 {ECO:0000313|EMBL:GAG86051.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_3685_9
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5095..6072)
DNA (978bp) protein (326aa)
Putative transcriptional regulator, Fis family n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123R9_POLSJ
Integrase {ECO:0000313|EMBL:KGE67622.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;"
Fis family transcriptional regulator
scnpilot_solids1_trim150_scaffold_3685_10
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6102..6320)
DNA (219bp) protein (73aa)
Integrase catalytic region n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW01_PUSST
integrase catalytic region
Integrase {ECO:0000313|EMBL:GAO35629.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
scnpilot_solids1_trim150_scaffold_3685_11
unknown

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comp(6455..6568)
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_12
unknown

Not on your lists

6711..6827
DNA (117bp) protein (39aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6871..7155
DNA (285bp) protein (95aa)
transcriptional regulator n=1 Tax=Thiobacillus denitrificans RepID=UPI0003671370
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_solids1_trim150_scaffold_3685_14
unknown

Not on your lists

7227..7520
DNA (294bp) protein (98aa)
hypothetical protein id=12498594 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
scnpilot_solids1_trim150_scaffold_3685_15
unknown

Not on your lists

7545..7844
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_16

Not on your lists

8307..9095
DNA (789bp) protein (263aa)
Putative integrase n=1 Tax=uncultured bacterium RepID=I6ZME9_9BACT rbh
Putative integrase {ECO:0000313|EMBL:AFN66379.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_3685_17

Not on your lists

9232..9534
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=I6YQ09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFN66378.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
scnpilot_solids1_trim150_scaffold_3685_18
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9707..11104)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI0003726F67 rbh
Cell division protein Fic {ECO:0000313|EMBL:KHD32226.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_3685_19
unknown

Not on your lists

comp(11077..11328)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_20
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11309..12157)
DNA (849bp) protein (283aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI81_THIDA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
scnpilot_solids1_trim150_scaffold_3685_21
unknown

Not on your lists

comp(12154..12438)
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_22
unknown

Not on your lists

comp(12542..12961)
DNA (420bp) protein (140aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_3685_trna_1
unknown

Not on your lists

comp(13197..13284)
DNA (88bp)
transferRNA Ser
Displaying 23 items

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