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scnpilot_solids1_trim150_scaffold_3802

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3802_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..720
DNA (720bp) protein (240aa)
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE id=12495168 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_2
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

845..1297
DNA (453bp) protein (151aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
alkylhydroperoxidase AhpD core id=12495167 bin=THIO_HI species=Brachymonas chironomi genus=Brachymonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
alkylhydroperoxidase AhpD core
scnpilot_solids1_trim150_scaffold_3802_3
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1350..2084)
DNA (735bp) protein (245aa)
hypothetical protein id=12495166 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU92480.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_solids1_trim150_scaffold_3802_4
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2081..2653)
DNA (573bp) protein (191aa)
hypothetical protein; K09154 hypothetical protein id=12495165 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK73282.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein; K09154 hypothetical protein
scnpilot_solids1_trim150_scaffold_3802_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2650..3942)
DNA (1293bp) protein (431aa)
dihydropteroate synthase DHPS id=12495164 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
dihydropteroate synthase DHPS
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3918..4475)
DNA (558bp) protein (186aa)
flavoprotein id=12495163 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
flavoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4492..4989)
DNA (498bp) protein (166aa)
pts; 6-pyruvoyl tetrahydropterin synthase id=12495162 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
pts; 6-pyruvoyl tetrahydropterin synthase
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4991..6970)
DNA (1980bp) protein (660aa)
Fis family GAF modulated sigma54 specific transcriptional regulator id=12495161 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Fis family GAF modulated sigma54 specific transcriptional regulator rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7252..7836
DNA (585bp) protein (195aa)
electron transport protein SCO1/SenC; K07152 id=12495160 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
electron transport protein SCO1/SenC; K07152
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7852..8775)
DNA (924bp) protein (308aa)
hypothetical protein id=12495159 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids1_trim150_scaffold_3802_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9165..9728)
DNA (564bp) protein (188aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] id=12495158 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
scnpilot_solids1_trim150_scaffold_3802_12
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9725..9961)
DNA (237bp) protein (79aa)
hypothetical protein; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2] id=12495157 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K00126 formate dehydrogenase, delta subunit [EC:1.2.1.2]
Formate dehydrogenase {ECO:0000313|EMBL:EYC51910.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
scnpilot_solids1_trim150_scaffold_3802_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9965..10789)
DNA (825bp) protein (275aa)
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein id=12495156 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids1_trim150_scaffold_3802_14
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10776..13625)
DNA (2850bp) protein (950aa)
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] id=12495155 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
formate dehydrogenase subunit alpha; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase {ECO:0000313|EMBL:KJV25934.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
scnpilot_solids1_trim150_scaffold_3802_15
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13622..14419)
DNA (798bp) protein (266aa)
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit id=12495154 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
fdsB; NAD-dependent formate dehydrogenase subunit beta (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 15 items

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