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scnpilot_solids1_trim150_scaffold_3857

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3857_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..827)
DNA (825bp) protein (275aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
lipid a ABC exporter, fused ATPase and inner membrane subunits msba; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
UPI0003D3B96D related cluster n=1 Tax=unknown RepID=UPI0003D3B96D
scnpilot_solids1_trim150_scaffold_3857_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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945..2240
DNA (1296bp) protein (432aa)
Protein TolB n=2 Tax=Alicycliphilus denitrificans RepID=E8TUY3_ALIDB rbh
Tol-Pal system beta propeller repeat-containing protein TolB; K03641 TolB protein rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_3857_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2271..2792
DNA (522bp) protein (174aa)
peptidoglycan-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378E11F
Outer membrane protein and related peptidoglycan-associated (Lipo)proteins {ECO:0000313|EMBL:GAD22117.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
OmpA domain-containing protein; K03640 peptidoglycan-associated lipoprotein
scnpilot_solids1_trim150_scaffold_3857_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2806..3570
DNA (765bp) protein (255aa)
tol-pal system protein YbgF n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037DC49A
Uncharacterized protein {ECO:0000313|EMBL:GAD22116.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
tol-pal system protein YbgF rbh
scnpilot_solids1_trim150_scaffold_3857_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3567..3836
DNA (270bp) protein (90aa)
UBA/THIF-type NAD/FAD-binding protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HY49_9BURK
UBA/THIF-type NAD/FAD-binding protein
UBA/THIF-type NAD/FAD-binding protein {ECO:0000313|EMBL:AFU45847.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids1_trim150_scaffold_3857_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3820..4305
DNA (486bp) protein (162aa)
UBA/THIF-type NAD/FAD binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TUY6_ALIDB
uba/thif-type nad/fad binding protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:AEB85520.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_3857_trna_1
unknown

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4326..4398
DNA (73bp)
transferRNA Lys
scnpilot_solids1_trim150_scaffold_3857_7
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4337..5491)
DNA (1155bp) protein (385aa)
Phage integrase n=1 Tax=mine drainage metagenome RepID=E6PTM0_9ZZZZ rbh
integrase family protein rbh
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_solids1_trim150_scaffold_3857_8

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comp(5706..7034)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PTM2_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBH98279.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_3857_9
R_WOR_1_46_20, WOR-1, Bacteria

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comp(7139..8035)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DL96_METS0
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_WOR_1_46_20_curated
scnpilot_solids1_trim150_scaffold_3857_10
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8200..9138)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA016 RepID=U9LK81_PSEAI rbh
Reverse transcriptase family protein {ECO:0000313|EMBL:KGC04562.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
RNA-directed DNA polymerase
Displaying 11 items

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