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scnpilot_solids1_trim150_scaffold_5393

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_5393_1
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3..653)
DNA (651bp) protein (217aa)
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CY54_TRURR rbh
glycine betaine ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein rbh
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:ADI14693.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids1_trim150_scaffold_5393_2
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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865..1902
DNA (1038bp) protein (346aa)
hypothetical protein; K00459 nitronate monooxygenase [EC:1.13.12.16] rbh
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AMV9_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14179.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
scnpilot_solids1_trim150_scaffold_5393_3
unknown

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comp(1935..2414)
DNA (480bp) protein (160aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_5393_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2502..3056
DNA (555bp) protein (185aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
2',5' RNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGL6_ANADE
scnpilot_solids1_trim150_scaffold_5393_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3126..3551)
DNA (426bp) protein (142aa)
PIN domain protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8G7_ACIC5
PIN domain protein; K07062
PIN domain protein {ECO:0000313|EMBL:ACO31820.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
scnpilot_solids1_trim150_scaffold_5393_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3554..3793)
DNA (240bp) protein (80aa)
Transcriptional regulator, AbrB family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8G8_ACIC5
transcriptional regulator, AbrB family
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ACO32573.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
scnpilot_solids1_trim150_scaffold_5393_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3901..4566)
DNA (666bp) protein (222aa)
FAD dependent oxidoreductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZA2_9BACT
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDY20793.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
FAD dependent oxidoreductase
Displaying 7 items

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